RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 KLHL22Q53GT1 634 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 OR2A2Q6IF42 318 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 LEG1Q6P5S2 330 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 SEM1Q6ZVN7 128 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 TMEM123Q8N131 208 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 C9orf106Q8NAJ2 232 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 CYB561A3Q8NBI2 242 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 RFKQ969G6 155 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 TMEM80Q96HE8 168 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 LRR1Q96L50 414 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 OR2M2Q96R28 347 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 RHNO1Q9BSD3 238 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 ALG12Q9BV10 488 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 NMNAT2Q9BZQ4 307 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 AMBNQ9NP70 447 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 HINT3Q9NQE9 182 aaKnown RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 MRPS18AQ9NVS2 196 aaKnown RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 SHANK1Q9Y566 2161 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 GTF3C1Q12789 2109 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 OR6C68A6NDL8 312 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 PRR23D1E9PI22 279 aaPredicted RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 PRODHO43272 600 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 ATE1O95260 518 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 PRR23D2P0DMB1 279 aaPredicted RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 DBTP11182 482 aaKnown RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 PAICSP22234 425 aaKnown RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 C21orf33P30042 268 aaPredicted RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 AGTR1P30556 359 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 SELENOPP49908 381 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 CAMK2DQ13557 499 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 AADACL4Q5VUY2 407 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 NXNL2Q5VZ03 156 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 NIPAL3Q6P499 406 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 CXXC5Q7LFL8 322 aaKnown RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 CPOQ8IVL8 374 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 NOXO1Q8NFA2 376 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 PTP4A1Q93096 173 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 ZNF775Q96BV0 537 aaPredicted RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 BBC3Q96PG8 261 aaPredicted RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 SYT4Q9H2B2 425 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 PARPBPQ9NWS1 579 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 CLEC4AQ9UMR7 237 aa12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 NOSIPQ9Y314 301 aaKnown RBP12.98□□□□□ -0.33
SMPDL3B-201ENST00000373888 SLC22A23A1A5C7 686 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 FAM183AA6NL82 134 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 H7C1C5 153 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 RENP00797 406 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 TIMP3P35625 211 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 SLC25A1P53007 311 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 LCN6P62502 163 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 ZNF91Q05481 1191 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 HIST3H3Q16695 136 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 TIGD6Q17RP2 521 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 EIF2S3LQ2VIR3 472 aaKnown RBP12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 PLBD1Q6P4A8 553 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 SLC16A12Q6ZSM3 486 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 AAED1Q7RTV5 226 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 FNDC8Q8TC99 324 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 ZFP3Q96NJ6 502 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 HCAR1Q9BXC0 346 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 NAA50Q9GZZ1 169 aaKnown RBP12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 DNAJC27Q9NZQ0 273 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 FOXD3Q9UJU5 478 aaPredicted RBP12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 TINAGQ9UJW2 476 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 ERGIC3Q9Y282 383 aa12.97□□□□□ -0.33
SMPDL3B-201ENST00000373888 KALRNO60229 2985 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 KMT2BQ9UMN6 2715 aaPredicted RBP12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 A0A1W2PPW3 197 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 SLC43A1O75387 559 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 MRPL33O75394 65 aaKnown RBP12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 TOXO94900 526 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 LCKP06239 509 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 NR2C1P13056 603 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 CLRN1P58418 232 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 RAB40BQ12829 278 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 CTF1Q16619 201 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 THEM4Q5T1C6 240 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 LINC00299Q6ZSB3 139 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 GID4Q8IVV7 300 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 C20orf196Q8IYI0 205 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 RPRMLQ8N4K4 120 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 SYT14Q8NB59 555 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 BBS1Q8NFJ9 593 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 TMEM54Q969K7 222 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 INTS12Q96CB8 462 aaKnown RBP12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 ZNF582Q96NG8 517 aaPredicted RBP12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 TTYH2Q9BSA4 534 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 MND1Q9BWT6 205 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 MED20Q9H944 212 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 RPRD1BQ9NQG5 326 aaKnown RBP12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 DIMT1Q9UNQ2 313 aaKnown RBP12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 FKBP7Q9Y680 259 aa12.96□□□□□ -0.33
SMPDL3B-201ENST00000373888 RAB36O95755 333 aa12.95□□□□□ -0.34
SMPDL3B-201ENST00000373888 CRHP06850 196 aa12.95□□□□□ -0.34
SMPDL3B-201ENST00000373888 GLI4P10075 376 aa12.95□□□□□ -0.34
SMPDL3B-201ENST00000373888 CD36P16671 472 aa12.95□□□□□ -0.34
SMPDL3B-201ENST00000373888 SPI1P17947 270 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms