RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
TRAF1-201ENST00000373887 FGF4P08620 206 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 CPT2P23786 658 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 HTR4Q13639 388 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 HMGN3Q15651 99 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 SLC5A12Q1EHB4 618 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 GLYR1Q49A26 553 aaPredicted RBP13.19□□□□□ -0.3
TRAF1-201ENST00000373887 RPL3LQ92901 407 aaKnown RBP13.19□□□□□ -0.3
TRAF1-201ENST00000373887 SYT11Q9BT88 431 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 C1QTNF6Q9BXI9 259 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 POFUT1Q9H488 388 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 SEMA4GQ9NTN9 838 aa13.19□□□□□ -0.3
TRAF1-201ENST00000373887 TMEM235A6NFC5 223 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 F6UZH7 168 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 TCAPO15273 167 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF264O43296 627 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 UTS2O95399 124 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAF1-201ENST00000373887 SSX7Q7RTT5 188 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 MRGPRX1Q96LB2 322 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 NT5DC2Q9H857 520 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 SPHK1Q9NYA1 384 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 WIF1Q9Y5W5 379 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 NUMA1Q14980 2115 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 KCNJ10P78508 379 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 CATSPERDQ86XM0 798 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 C2CD4CQ8TF44 421 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 HRASLS5Q96KN8 279 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 SHARPINQ9H0F6 387 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 USP22Q9UPT9 525 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 BIDP55957 195 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 SPEM2Q0P670 501 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 SEMA3BQ13214 749 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 YIPF5Q969M3 257 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 NKX6-3A6NJ46 265 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 MTHFD2P13995 350 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 NPY4RP50391 375 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 CARD18P57730 90 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF91Q05481 1191 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 ZFPM2Q8WW38 1151 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 K7EQM0 130 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 TMEM200AQ86VY9 491 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 UTP4Q969X6 686 aaKnown RBP13.18□□□□□ -0.3
TRAF1-201ENST00000373887 VPS25Q9BRG1 176 aa13.18□□□□□ -0.3
TRAF1-201ENST00000373887 TMEM212A6NML5 194 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 CCSO14618 274 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 HS3ST1O14792 307 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 HOXC11O43248 304 aaPredicted RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 OPRD1P41143 372 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 TMEM182Q6ZP80 229 aaPredicted RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 OR10R2Q8NGX6 335 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 LURAP1Q96LR2 239 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 DCLRE1CQ96SD1 692 aaKnown RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ALG12Q9BV10 488 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 AMBRA1Q9C0C7 1298 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ATP6V1G2-DDX39BF2Z307 99 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 PRKNO60260 465 aaPredicted RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ALOX12BO75342 701 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 IGHEP01854 428 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 HYAL1Q12794 435 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 CBLL1Q75N03 491 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 RNF141Q8WVD5 230 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 TNFRSF13CQ96RJ3 184 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF416Q9BWM5 594 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 GON7Q9BXV9 100 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 GORASP2Q9H8Y8 452 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 SLC2A8Q9NY64 477 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF230Q9UIE0 474 aaPredicted RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 R4GN57 208 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ZNF732B4DXR9 585 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 OLFM2O95897 454 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 AGFG1P52594 562 aaKnown RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 TAF9Q16594 264 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 BCDIN3DQ7Z5W3 292 aaKnown RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 CELF2-AS1Q8N7Q2 184 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 PSD2Q9BQI7 771 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ABHD6Q9BV23 337 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 NTF3P20783 257 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 TACR1P25103 407 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 ADPRMQ3LIE5 342 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 OR2T11Q8NH01 316 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 FGGYQ96C11 551 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 NMNAT3Q96T66 252 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 CLMPQ9H6B4 373 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 TMEM9BQ9NQ34 198 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 TRA2BP62995 288 aaKnown RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 NMES1Q9C002 83 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 C20orf85Q9H1P6 137 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 TUBB1Q9H4B7 451 aa13.17□□□□□ -0.3
TRAF1-201ENST00000373887 EXO1Q9UQ84 846 aaKnown RBP13.17□□□□□ -0.3
TRAF1-201ENST00000373887 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
TRAF1-201ENST00000373887 A0A1B0GX78 115 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 ABHD16AO95870 558 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 METTL15P1P0C7V9 234 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 ELK1P19419 428 aa13.16□□□□□ -0.3
TRAF1-201ENST00000373887 CYB561P49447 251 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms