RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 CLIC3O95833 236 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 IGKV2D-28P01615 120 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 PLEKP08567 350 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 ANXA5P08758 320 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 IFNA8P32881 189 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 LONP1P36776 959 aaKnown RBP2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 NSG1P42857 185 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 TFPI2P48307 235 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 MRPS22P82650 360 aaKnown RBP2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 TGM3Q08188 693 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 EBI3Q14213 229 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 C16orf72Q14CZ0 275 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 PON3Q15166 354 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 SSX2Q16385 188 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 ZSCAN26Q16670 478 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 ALKBH6Q3KRA9 238 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 HSP90AB3PQ58FF7 597 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 SLC8B1Q6J4K2 584 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 NANOGNBQ7Z5D8 188 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 CAMK2N1Q7Z7J9 78 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 H1FOOQ8IZA3 346 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 EID2Q8N6I1 236 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 ZFP41Q8N8Y5 198 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 FBXL13Q8NEE6 735 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 OR56B2PQ8NGI1 322 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 OR5B3Q8NH48 314 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 GEMIN6Q8WXD5 167 aaKnown RBP2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 RASD2Q96D21 266 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 FOPNLQ96NB1 174 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 WFIKKN1Q96NZ8 548 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 TAAR1Q96RJ0 339 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 ATP5SQ99766 215 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 SLC29A1Q99808 456 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 OR51M1Q9H341 326 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 RPF2Q9H7B2 306 aaKnown RBP2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 NMRK1Q9NWW6 199 aa2.12□□□□□ -2.07
ECHDC1-201ENST00000368287 RAB29O14966 203 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 KMOO15229 486 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 EIF3HO15372 352 aaKnown RBP eCLIP2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 CIB2O75838 187 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 CLPXO76031 633 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 C6orf47O95873 294 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 BGLAPP02818 100 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 TLX1NBP0CAT3 122 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 TNNI1P19237 187 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 HRH1P35367 487 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 SERPINB5P36952 375 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 AQP2P41181 271 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 CCNHP51946 323 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 MNAT1P51948 309 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 ACLYP53396 1101 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 CDH6P55285 790 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 ATP5IP56385 69 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 NUTF2P61970 127 aaKnown RBP2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 YWHAGP61981 247 aaKnown RBP eCLIP2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 SLC7A9P82251 487 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 SMARCB1Q12824 385 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 SRSF5Q13243 272 aaKnown RBP2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 CHRNA6Q15825 494 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 TTLL9Q3SXZ7 439 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 VPS26BQ4G0F5 336 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 XKR7Q5GH72 579 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 TMEM255AQ5JRV8 349 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 SOHLH1Q5JUK2 328 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 ZNF691Q5VV52 312 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 OR52W1Q6IF63 320 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 DNAJC24Q6P3W2 148 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 ZFP2Q6ZN57 461 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 C12orf56Q8IXR9 622 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 SAXO1Q8IYX7 474 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 ELMO1Q92556 727 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 PANX1Q96RD7 426 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 KCTD14Q9BQ13 255 aaPredicted RBP2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 CCDC77Q9BR77 488 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 CENPKQ9BS16 269 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 OSBPL10Q9BXB5 764 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 PKIBQ9C010 78 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 NUP50Q9UKX7 468 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 PSG11Q9UQ72 335 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 N6AMT1Q9Y5N5 214 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 PCM1Q15154 2024 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 CAMTA1Q9Y6Y1 1673 aa2.11□□□□□ -2.07
ECHDC1-201ENST00000368287 DENND4AQ7Z401 1863 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ZNF816-ZNF321PA0A0X1KG74 233 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 H3BNH8 94 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 SOX15O60248 233 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 SPAG7O75391 227 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 AIFM1O95831 613 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 GNAO1P09471 354 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ZNF823P16415 610 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 MAS1LP35410 378 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 TMED10P49755 219 aaKnown RBP2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 HMGCS1Q01581 520 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 SLC25A11Q02978 314 aaKnown RBP2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ARHGAP19Q14CB8 494 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ARMC12Q5T9G4 340 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 LRRC66Q68CR7 880 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 ANKRD26P1Q6NSI1 321 aa2.1□□□□□ -2.07
ECHDC1-201ENST00000368287 PDIK1LQ8N165 341 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms