RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 OR2M4Q96R27 311 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 GPX7Q96SL4 187 aaPredicted RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 NMNAT2Q9BZQ4 307 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 ENKD1Q9H0I2 346 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 SLITRK2Q9H156 845 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 ALX4Q9H161 411 aaPredicted RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 NOX3Q9HBY0 568 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 MCCC2Q9HCC0 563 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 MEPEQ9NQ76 525 aaPredicted RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 C12orf4Q9NQ89 552 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 SLC39A1Q9NY26 324 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 MED11Q9P086 117 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 PILRAQ9UKJ1 303 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 AK6Q9Y3D8 172 aaKnown RBP10.46□□□□□ -0.73
USF1-201ENST00000368019 SLC22A7Q9Y694 548 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 COLEC10Q9Y6Z7 277 aa10.46□□□□□ -0.73
USF1-201ENST00000368019 RELNP78509 3460 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 USP9YO00507 2555 aaPredicted RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 A0A1W2PS29 197 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 TTLL8A6PVC2 850 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 ARPC1BO15143 372 aaKnown RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 B3GALT2O43825 422 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 GMDSO60547 372 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 CTNSO60931 367 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 TSPAN9O75954 239 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 ALDOBP05062 364 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 MRPL3P09001 348 aaKnown RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 SLC35G6P0C7Q6 338 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 APEHP13798 732 aaKnown RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 GABRA1P14867 456 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 PTH2RP49190 550 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 P2RX1P51575 399 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 SLC25A1P53007 311 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 SLC16A1P53985 500 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 PSMD4P55036 377 aaKnown RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 GMFBP60983 142 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 SEC61A1P61619 476 aaKnown RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 BTN3A2P78410 334 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 MC2RQ01718 297 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.74
USF1-201ENST00000368019 FHL1Q13642 323 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 PON3Q15166 354 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 RBMS2Q15434 407 aaKnown RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 GPR68Q15743 365 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 PWWP2BQ6NUJ5 590 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 TMEM81Q6P7N7 255 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 ARSKQ6UWY0 536 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 DPY19L2P2Q6ZN68 376 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 SSX6Q7RTT6 188 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 IL22RA1Q8N6P7 574 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 COX18Q8N8Q8 333 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 BEST4Q8NFU0 473 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 OR5T2Q8NGG2 359 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 SMAP2Q8WU79 429 aaPredicted RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 SNX33Q8WV41 574 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 ORAI1Q96D31 301 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 DERL3Q96Q80 235 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 MYOZ1Q9NP98 299 aaPredicted RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 SLC17A5Q9NRA2 495 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 TUBD1Q9UJT1 453 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 DAPP1Q9UN19 280 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 MRPS7Q9Y2R9 242 aaKnown RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 SLC6A5Q9Y345 797 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 SPACA6W5XKT8 324 aa10.45□□□□□ -0.74
USF1-201ENST00000368019 USP9XQ93008 2570 aaPredicted RBP10.45□□□□□ -0.74
USF1-201ENST00000368019 UTP20O75691 2785 aaKnown RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 TRBV5-5A0A0J9YX44 114 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 A0A1B0GVC2 190 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 A6NCN8 305 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 A6NIN4 97 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 EFCAB7A8K855 629 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 H7C417 338 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 TOR1AO14656 332 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 IMPA2O14732 288 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 PIN1P1O15428 100 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 SUSD5O60279 629 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 RAD1O60671 282 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 DNAJB6O75190 326 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 GLSO94925 669 aaPredicted RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 CSF1P09603 554 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 TACSTD2P09758 323 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 RPA2P15927 270 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 MAP2K6P52564 334 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 ART1P52961 327 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 TLE1Q04724 770 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 STX4Q12846 297 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 GK2Q14410 553 aaPredicted RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 ZNF273Q14593 569 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 HLXQ14774 488 aaPredicted RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 KIR2DS3Q14952 304 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 TP53I3Q53FA7 332 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 ZNF684Q5T5D7 378 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 DCAF12Q5T6F0 453 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 PXDC1Q5TGL8 231 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 WDR74Q6RFH5 385 aaPredicted RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 APOOLQ6UXV4 268 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 RPTNQ6XPR3 784 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 SLC36A1Q7Z2H8 476 aa10.44□□□□□ -0.74
USF1-201ENST00000368019 TIPARPQ7Z3E1 657 aaKnown RBP10.44□□□□□ -0.74
USF1-201ENST00000368019 ZNF761Q86XN6 746 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms