RNA–Protein interactions for RNA: ENST00000362944.1

RNU6-1260P-201, Transcript of RNA, U6 small nuclear 1260, pseudogene, humanhuman

BASIC

Gene RNU6-1260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1260P-201ENST00000362944 GPR89AB7ZAQ6 455 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 D6RAR5 112 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 RS1O15537 224 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CHST10O43529 356 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CXCL13O43927 109 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 SH3BP5O60239 455 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 RAB36O95755 333 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 IGHMP01871 453 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 GPR89BP0CG08 455 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 AK4P27144 223 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 PRDX6P30041 224 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 YWHABP31946 246 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 SSTR5P35346 364 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 MAS1LP35410 378 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 KRT20P35900 424 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 RAD52P43351 418 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 RFX3P48380 749 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ERFP50548 548 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 TPMTP51580 245 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 HNRNPFP52597 415 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 PRMT2P55345 433 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 SNU13P55769 128 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CCL23P55773 120 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CMC4P56277 68 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 KRT83P78385 493 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 HES1Q14469 280 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 PRPSAP1Q14558 356 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 DMC1Q14565 340 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 TSC22D1Q15714 1073 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CEBPEQ15744 281 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ZSCAN26Q16670 478 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 PDZD11Q5EBL8 140 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 APOBEC3HQ6NTF7 200 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ZNF322Q6U7Q0 402 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 FAM159AQ6UWV7 190 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 FAM131AQ6UXB0 335 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 DLEU7Q6UYE1 221 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 FBXW12Q6X9E4 464 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 PGAP1Q75T13 922 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 OR2L13Q8N349 312 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 LINC00469Q8N7U9 141 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 OR4D9Q8NGE8 314 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 NANPQ8TBE9 248 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 DEPDC1BQ8WUY9 529 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 HTR3CQ8WXA8 447 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CPNE4Q96A23 557 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 PTX4Q96A99 478 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 MED8Q96G25 268 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 GPR82Q96P67 336 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 WRAP53Q9BUR4 548 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 RBKSQ9H477 322 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ACTR8Q9H981 624 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 LPAR2Q9HBW0 351 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ZNF302Q9NR11 478 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 YAE1D1Q9NRH1 226 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 HOMER3Q9NSC5 361 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 NUDT15Q9NV35 164 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 LIPT1Q9Y234 373 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 RPL36Q9Y3U8 105 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 SPACA6W5XKT8 324 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 TNCP24821 2201 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 POLEQ07864 2286 aa-0.41□□□□□ -2.48
RNU6-1260P-201ENST00000362944 MSH6P52701 1360 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 MUC12Q9UKN1 5478 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 OTOFQ9HC10 1997 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 TRAV6A0A075B6T7 132 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 IGHV7-4-1A0A0J9YVY3 117 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 MYBPHLA2RUH7 354 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CLDN34H7C241 214 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 REM1O75628 298 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 UTS2O95399 124 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CDS2O95674 445 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 MMP7P09237 267 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 SLC35G6P0C7Q6 338 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 THRAP10827 490 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 COX5AP20674 150 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ADRA1AP35348 466 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 DDOSTP39656 456 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 GPR6P46095 362 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 SUB1P53999 127 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ATP1B3P54709 279 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CDK5Q00535 292 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 GFPT1Q06210 699 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ORMDL2Q53FV1 153 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 CARD16Q5EG05 197 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 LIN9Q5TKA1 542 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 METTL21CQ5VZV1 264 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 SPATA8Q6RVD6 105 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ASCL5Q7RTU5 278 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 HDDC2Q7Z4H3 204 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 VPS36Q86VN1 386 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 TMEM17Q86X19 198 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ZCCHC24Q8N2G6 241 aaKnown RBP-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 LSMEM1Q8N8F7 131 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 LEMD2Q8NC56 503 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 OR4C13Q8NGP0 309 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 ZNF606Q8WXB4 792 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 OR5P3Q8WZ94 311 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 C12orf66Q96MD2 445 aa-0.42□□□□□ -2.48
RNU6-1260P-201ENST00000362944 SPATA13Q96N96 652 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms