RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TP53BP2Q13625 1128 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 GNA13Q14344 377 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 TAF11Q15544 211 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 FAM189A2Q15884 450 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 ATP6AP1LQ52LC2 224 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 ESCO2Q56NI9 601 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 FAM69AQ5T7M9 428 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 KRT80Q6KB66 452 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 DHRS4L2Q6PKH6 230 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 SKA3Q8IX90 412 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 EXT2Q93063 718 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 NAPGQ99747 312 aaPredicted RBP4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 SYT3Q9BQG1 590 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 PARD6BQ9BYG5 372 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 PPP2R2CQ9Y2T4 447 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 ROS1P08922 2347 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 CEACAM18A8MTB9 384 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 HMGN4O00479 90 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 AKR7A3O95154 331 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 CLPTM1O96005 669 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 OR8G3PP0DMU2 310 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 CD200P41217 278 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 RAB1AP62820 205 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 TBC1D28Q2M2D7 210 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 TEX36Q5VZQ5 186 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 FBXW12Q6X9E4 464 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 C6orf120Q7Z4R8 191 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 GLB1L2Q8IW92 636 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 GATAD2BQ8WXI9 593 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 HAVCR1Q96D42 359 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 PLEKHA8Q96JA3 519 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 PPP3R2Q96LZ3 170 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 ALKBH3Q96Q83 286 aaPredicted RBP4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 DECR2Q9NUI1 292 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 STX18Q9P2W9 335 aaKnown RBP4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 U3KQK5 164 aa4.93□□□□□ -1.62
CDC42SE2-201ENST00000360515 E9PQ18 207 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 AHCYL1O43865 530 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 HPRP00739 348 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 PGA4P0DJD7 388 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 PGA3P0DJD8 388 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 PHBP35232 272 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 RBMXP38159 391 aaKnown RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 WNT5AP41221 380 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 CCT5P48643 541 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 MVDP53602 400 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZNF718Q3SXZ3 478 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 PAQR4Q8N4S7 273 aaPredicted RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 CNOT9Q92600 299 aaKnown RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 PHF21BQ96EK2 531 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 GAL3ST1Q99999 423 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 ARPC5LQ9BPX5 153 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 NUDT16L1Q9BRJ7 211 aaKnown RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 SLC19A3Q9BZV2 496 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 DNTTIP1Q9H147 329 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 LRMDAQ9H2I8 198 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 CALML5Q9NZT1 146 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 PRPF19Q9UMS4 504 aaKnown RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 CDH2P19022 906 aaPredicted RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 KRTAP10-11P60412 298 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 HIST1H3AP68431 136 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 HBA1P69905 142 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 GUCA2AQ02747 115 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 CCDC153Q494R4 210 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 HIST2H3PS2Q5TEC6 136 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 WDR25Q64LD2 544 aaPredicted RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 C11orf87Q6NUJ2 197 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 WDR88Q6ZMY6 472 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 HIST2H3AQ71DI3 136 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 HDXQ7Z353 690 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 CEP112Q8N8E3 955 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 ARHGDIGQ99819 225 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 TAPBPLQ9BX59 468 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 BATF3Q9NR55 127 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 ACOXLQ9NUZ1 547 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 RPUSD1Q9UJJ7 312 aaKnown RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 POLR3HQ9Y535 204 aaPredicted RBP4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 TENM3Q9P273 2699 aa4.92□□□□□ -1.62
CDC42SE2-201ENST00000360515 ZNF816-ZNF321PA0A0X1KG74 233 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 TMEM114B3SHH9 223 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 PLPP3O14495 311 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 PIP5K1CO60331 668 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 LYPD3O95274 346 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 TGDSO95455 350 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 PROCP04070 461 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 SFTPBP07988 381 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 CST2P09228 141 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 LAMP1P11279 417 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 SEC61A1P61619 476 aaKnown RBP4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 CASP8Q14790 479 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 RFTN2Q52LD8 501 aaPredicted RBP4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 HSP90B2PQ58FF3 399 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 CEP85LQ5SZL2 805 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 AVPI1Q5T686 147 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 ATPAF1Q5TC12 328 aaPredicted RBP4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 FNDC8Q8TC99 324 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 MGARPQ8TDB4 240 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 SLC47A1Q96FL8 570 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 SLC35G5Q96KT7 338 aa4.91□□□□□ -1.62
CDC42SE2-201ENST00000360515 PPCSQ9HAB8 311 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms