RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 C19orf47Q8N9M1 422 aaKnown RBP14.78□□□□□ -0.04
COL18A1-203ENST00000359759 LMO7Q8WWI1 1683 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 BLACEA4D250 179 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 FITM1A5D6W6 292 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 SSSCA1O60232 199 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 ENPP1P22413 925 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 SRPXP78539 464 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 BTNL8Q6UX41 500 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 SLC24A4Q8NFF2 622 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 CXorf36Q9H7Y0 433 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 GPR173Q9NS66 373 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 LGALS8O00214 317 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 LIPAP38571 399 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 PTTG1IPP53801 180 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 DMWDQ09019 674 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 EXOSC2Q13868 293 aaKnown RBP14.78□□□□□ -0.04
COL18A1-203ENST00000359759 VAMP3Q15836 100 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 ZNF626Q68DY1 528 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 FAM71CQ8NEG0 241 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 ZCCHC4Q9H5U6 513 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 DIMT1Q9UNQ2 313 aaKnown RBP14.78□□□□□ -0.04
COL18A1-203ENST00000359759 ETV7Q9Y603 341 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 TRAV36DV7A0A075B6V5 113 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 NKX6-3A6NJ46 265 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 TERTO14746 1132 aaKnown RBP14.78□□□□□ -0.04
COL18A1-203ENST00000359759 OR2J3O76001 311 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 DFFBO76075 338 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 LGI1O95970 557 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 CA3P07451 260 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 SSR4P51571 173 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 UBE2MP61081 183 aaKnown RBP14.78□□□□□ -0.04
COL18A1-203ENST00000359759 RFLNAQ6ZTI6 216 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 NAXDQ8IW45 347 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 OR13F1Q8NGS4 319 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 SLC2A8Q9NY64 477 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 RAB22AQ9UL26 194 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 PRELID3BQ9Y3B1 194 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 PPP5D1E7EU14 171 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 G0S2P27469 103 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 ZNF90Q03938 601 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 ADIPOR2Q86V24 386 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 CTRCQ99895 268 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 CREBZFQ9NS37 354 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 MED17Q9NVC6 651 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 SIGLEC6O43699 453 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 CSF3P09919 207 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 ZNF813Q6ZN06 617 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 OR10J5Q8NHC4 309 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 ZNF768Q9H5H4 540 aaKnown RBP14.77□□□□□ -0.04
COL18A1-203ENST00000359759 TAS2R4Q9NYW5 299 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 PTTG3PQ9NZH4 202 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 LHX6Q9UPM6 363 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 GOLT1BQ9Y3E0 138 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 MICAL3Q7RTP6 2002 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 DRGXA6NNA5 263 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 FUCA1P04066 466 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 TFAP2AP05549 437 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 ETV6P41212 452 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 OPN5Q6U736 354 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 CLDN22Q8N7P3 220 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 TMEM102Q8N9M5 508 aaPredicted RBP14.77□□□□□ -0.04
COL18A1-203ENST00000359759 KDF1Q8NAX2 398 aaPredicted RBP14.77□□□□□ -0.04
COL18A1-203ENST00000359759 OR5M8Q8NGP6 311 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 OR14A16Q8NHC5 309 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 C12orf10Q9HB07 376 aa14.77□□□□□ -0.04
COL18A1-203ENST00000359759 ADAM12O43184 909 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 SCO1O75880 301 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 SLC35A1P78382 337 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 HNRNPA1L2Q32P51 320 aaKnown RBP14.77□□□□□ -0.05
COL18A1-203ENST00000359759 FAAP20Q6NZ36 180 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 SPHK1Q9NYA1 384 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 LTN1O94822 1766 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 TMEM221A6NGB7 291 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 H2AFB1P0C5Y9 115 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 LCN15Q6UWW0 184 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 C17orf107Q6ZR85 190 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 SEMA4CQ9C0C4 833 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 CHST8Q9H2A9 424 aa14.77□□□□□ -0.05
COL18A1-203ENST00000359759 B3GALT4O96024 378 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 HENMT1Q5T8I9 393 aaKnown RBP14.76□□□□□ -0.05
COL18A1-203ENST00000359759 GLCCI1Q86VQ1 547 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 FIZ1Q96SL8 496 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 MYH13Q9UKX3 1938 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 RPS19P39019 145 aaKnown RBP14.76□□□□□ -0.05
COL18A1-203ENST00000359759 LGALS4P56470 323 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 FAM26DQ5JW98 314 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 SIGLECL1Q8N7X8 197 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 ACSS1Q9NUB1 689 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-203ENST00000359759 A0A1B0GWA3 101 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 SPINT2O43291 252 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 RETREG3Q86VR2 466 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 AMIGO3Q86WK7 504 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 ARRDC3Q96B67 414 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 MED30Q96HR3 178 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 LANCL2Q9NS86 450 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 COA3Q9Y2R0 106 aaPredicted RBP14.76□□□□□ -0.05
COL18A1-203ENST00000359759 PRSS44E7EML9 344 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 LALBAP00709 142 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 FURINP09958 794 aa14.76□□□□□ -0.05
COL18A1-203ENST00000359759 BTF3L4Q96K17 158 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms