RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 GLO1Q04760 184 aa22.04■■□□□ 1.12
SHARPIN-201ENST00000359551 LRFN4Q6PJG9 635 aa22.04■■□□□ 1.12
SHARPIN-201ENST00000359551 ACBD7Q8N6N7 88 aa22.04■■□□□ 1.12
SHARPIN-201ENST00000359551 SNRNP40Q96DI7 357 aaKnown RBP22.04■■□□□ 1.12
SHARPIN-201ENST00000359551 COA3Q9Y2R0 106 aaPredicted RBP22.04■■□□□ 1.12
SHARPIN-201ENST00000359551 SLC43A1O75387 559 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 YES1P07947 543 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 LIMS3P0CW19 117 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 LIMS4P0CW20 117 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 MYL12AP19105 171 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 ETV1P50549 477 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 ACTC1P68032 377 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 ACTA1P68133 377 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 NEDD8Q15843 81 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 ACSF3Q4G176 576 aaPredicted RBP22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 UBE2UQ5VVX9 321 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 TUSC5Q8IXB3 177 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 OR5M9Q8NGP3 310 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 FCGR1BQ92637 280 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 CLEC2DQ9UHP7 191 aa22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 NOSIPQ9Y314 301 aaKnown RBP22.03■■□□□ 1.12
SHARPIN-201ENST00000359551 PHF3Q92576 2039 aaKnown RBP22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 C12orf71A8MTZ7 269 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 SELENOFO60613 162 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 PTHP01270 115 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 QDPRP09417 244 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 PHYHD1Q5SRE7 291 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 C10orf128Q5T292 105 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 C19orf48Q6RUI8 117 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 SLC16A9Q7RTY1 509 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 MCEMP1Q8IX19 187 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 NANOGP1Q8N7R0 232 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 SLC26A10Q8NG04 563 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 OR6N1Q8NGY5 312 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 MUL1Q969V5 352 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 BATF3Q9NR55 127 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 PARPBPQ9NWS1 579 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 MRPL22Q9NWU5 206 aaKnown RBP22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 ERVK13-1Q9NX77 482 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 ERGIC3Q9Y282 383 aa22.02■■□□□ 1.12
SHARPIN-201ENST00000359551 TMEM129A0AVI4 362 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 ERVH48-1M5A8F1 160 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 OR2T7P0C7T2 308 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 GAAP10253 952 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 NAA10P41227 235 aaPredicted RBP22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 SF3B4Q15427 424 aaKnown RBP eCLIP22.01■■□□□ 1.113e-6■□□□□ 8.9
SHARPIN-201ENST00000359551 OR2T27Q8NH04 317 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 WNT2BQ93097 391 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 TRIB1Q96RU8 372 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 CALHM2Q9HA72 323 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 GLRX2Q9NS18 164 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 LSM2Q9Y333 95 aaKnown RBP22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 PRRC2CQ9Y520 2896 aaKnown RBP22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 ACACBO00763 2458 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 TVP23AA6NH52 213 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 GPANK1O95872 356 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 HSF2Q03933 536 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 GLB1L2Q8IW92 636 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 SLC35F2Q8IXU6 374 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 OR10H4Q8NGA5 316 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 GMPPAQ96IJ6 420 aaPredicted RBP22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 INTS14Q96SY0 518 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 MND1Q9BWT6 205 aa22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 CHCHD3Q9NX63 227 aaKnown RBP22.01■■□□□ 1.11
SHARPIN-201ENST00000359551 FREM1Q5H8C1 2179 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 PKD1L2Q7Z442 2459 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 CD8B2A6NJW9 211 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 WDR1O75083 606 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 MRPL33O75394 65 aaKnown RBP22■■□□□ 1.11
SHARPIN-201ENST00000359551 HRGP04196 525 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 LCKP06239 509 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 GABRA1P14867 456 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 PTGER4P35408 488 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 SYT6Q5T7P8 510 aaPredicted RBP22■■□□□ 1.11
SHARPIN-201ENST00000359551 RIPPLY2Q5TAB7 128 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 NSUN5P2Q63ZY6 315 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 P4HA3Q7Z4N8 544 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 LHFPL3Q86UP9 236 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 ERI1Q8IV48 349 aaKnown RBP22■■□□□ 1.11
SHARPIN-201ENST00000359551 FAM57AQ8TBR7 257 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 NSMAFQ92636 917 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 RORBQ92753 470 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 MNTQ99583 582 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 LINC00470Q9BZP3 86 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 YIPF3Q9GZM5 350 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 WDR76Q9H967 626 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 ASF1BQ9NVP2 202 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 CLEC4AQ9UMR7 237 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 UGT2A1Q9Y4X1 527 aa22■■□□□ 1.11
SHARPIN-201ENST00000359551 ZNF99A8MXY4 864 aaPredicted RBP21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 SS18L1O75177 396 aaPredicted RBP21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 LAP3P28838 519 aa21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 ZNF85Q03923 595 aa21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 PRR30Q53SZ7 412 aaPredicted RBP21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 FOXL2NBQ6ZUU3 175 aa21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 ZNF485Q8NCK3 441 aa21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 SMAP2Q8WU79 429 aaPredicted RBP21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 CNTNAP3BQ96NU0 1288 aa21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 CNTNAP3Q9BZ76 1288 aa21.99■■□□□ 1.11
SHARPIN-201ENST00000359551 SPENQ96T58 3664 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms