RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 DEFB132Q7Z7B7 95 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 SLC35F3Q8IY50 421 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 OR10J5Q8NHC4 309 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 ZMYND19Q96E35 227 aaPredicted RBP12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 F2RL3Q96RI0 385 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 CDC6Q99741 560 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 RNF126Q9BV68 326 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 KCNIP3Q9Y2W7 256 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 FLVCR1Q9Y5Y0 555 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 EP400Q96L91 3159 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 NDUFA6P56556 154 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 TAS2R38P59533 333 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 HNRNPKP61978 463 aaKnown RBP eCLIP12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 RAB1AP62820 205 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 USF2Q15853 346 aaPredicted RBP12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 Q499Y3 187 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 EIF5AL1Q6IS14 154 aaKnown RBP12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 SPNS3Q6ZMD2 512 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 HIST2H3AQ71DI3 136 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 PPP1R3BQ86XI6 285 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 ZSCAN4Q8NAM6 433 aaPredicted RBP12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 OR1J1Q8NGS3 322 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 PFN4Q8NHR9 129 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 LYPD6BQ8NI32 183 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 PHB2Q99623 299 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 VSX1Q9NZR4 365 aaPredicted RBP12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 TRPV2Q9Y5S1 764 aa12.1□□□□□ -0.47
SPTSSB-201ENST00000359175 M0R036 132 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 EIF1AYO14602 144 aaKnown RBP12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 SRPX2O60687 465 aaPredicted RBP12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 TBL1XO60907 577 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 ARG1P05089 322 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 ST6GAL1P15907 406 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 G0S2P27469 103 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 EIF1AXP47813 144 aaKnown RBP12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 NCBP2P52298 156 aaKnown RBP eCLIP12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 NANOS3P60323 173 aaKnown RBP12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 SRSF5Q13243 272 aaKnown RBP12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 OR13C8Q8NGS7 320 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 C16orf58Q96GQ5 468 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 A8MWP6 167 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 PRAMEF26H0Y7S4 382 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 AGPAT2O15120 278 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 TMPRSS11DO60235 418 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 DCNP07585 359 aaKnown RBP12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 SULT1A2P50226 295 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 EFNB2P52799 333 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 ACTBL2Q562R1 376 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 ZNF585AQ6P3V2 769 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 FAM129CQ86XR2 697 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 LMNTD1Q8N9Z9 388 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 OR8D1Q8WZ84 308 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 OR7D2Q96RA2 312 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 MS4A8Q9BY19 250 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 NMES1Q9C002 83 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 RHBGQ9H310 441 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 PTGES2Q9H7Z7 377 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 KCNG2Q9UJ96 466 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 MMACHCQ9Y4U1 282 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 CXCL11O14625 94 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 PRICKLE3O43900 615 aaPredicted RBP12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 GLCEO94923 617 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 AK1P00568 194 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 SFTPBP07988 381 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 MPZP25189 248 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 HOXC8P31273 242 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 BIVMQ86UB2 503 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 NRROSQ86YC3 692 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 FRMD1Q8N878 549 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 OR13C2Q8NGS9 318 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 TMEM239Q8WW34 195 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 NDUFAF3Q9BU61 184 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 LGR4Q9BXB1 951 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 GPR174Q9BXC1 333 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 SYT4Q9H2B2 425 aa12.09□□□□□ -0.47
SPTSSB-201ENST00000359175 EEF1E1-BLOC1S5C9J1V9 151 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 M0QYG6 137 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 ADAM10O14672 748 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 PLGP00747 810 aaPredicted RBP12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 CFPP27918 469 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 RAP1AP62834 184 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 EIF5AP63241 154 aaKnown RBP12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 PPP1R1AQ13522 171 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 WDR88Q6ZMY6 472 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 PRSS35Q8N3Z0 413 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 AVL9Q8NBF6 648 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 BEND2Q8NDZ0 799 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 OR56A1Q8NGH5 318 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 MAFIPQ8WZ33 124 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 PRSS16Q9NQE7 514 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 SLC23A2Q9UGH3 650 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 VSIG4Q9Y279 399 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 STARD10Q9Y365 291 aa12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 MTCL1Q9Y4B5 1905 aaKnown RBP12.08□□□□□ -0.48
SPTSSB-201ENST00000359175 COL4A3Q01955 1670 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms