RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CIB4A0PJX0 185 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 FAM183AA6NL82 134 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 ZNF99A8MXY4 864 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 PRR23D1E9PI22 279 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 RPL36A-HNRNPH2H7BZ11 118 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 DHHO43323 396 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 ITGA5P08648 1049 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 PRR23D2P0DMB1 279 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 CTLA4P16410 223 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 COX5AP20674 150 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 GGT2P36268 569 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 CD79BP40259 229 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 PCYT1AP49585 367 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 FOXG1P55316 489 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 SH3BGRP55822 239 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 SRSF1Q07955 248 aaKnown RBP eCLIP13.42□□□□□ -0.264e-10■■■□□ 14.7
TPM1-206ENST00000358278 FBXL19-AS1Q494R0 122 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 ZNF362Q5T0B9 420 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 OR9Q1Q8NGQ5 310 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 NMD3Q96D46 503 aaKnown RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 ZNF837Q96EG3 531 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 TSSK2Q96PF2 358 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 ADI1Q9BV57 179 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 NUAK2Q9H093 628 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 IGKV1D-43A0A0B4J1Z2 117 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 WIPF3A6NGB9 483 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 SLC16A6O15403 523 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 PRKYO43930 277 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 RAD51DO75771 328 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 RNF224P0DH78 156 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 IL32P24001 234 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 GUCA1AP43080 201 aaPredicted RBP13.41□□□□□ -0.26
TPM1-206ENST00000358278 FAM27E3Q08E93 113 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 C10orf128Q5T292 105 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 TTC23Q5W5X9 447 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 ZNF433Q8N7K0 673 aaPredicted RBP13.41□□□□□ -0.26
TPM1-206ENST00000358278 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 OR2T4Q8NH00 348 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 RNASE6Q93091 150 aaKnown RBP13.41□□□□□ -0.26
TPM1-206ENST00000358278 PITX2Q99697 317 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 FOXB1Q99853 325 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 RASSF4Q9H2L5 321 aa13.41□□□□□ -0.26
TPM1-206ENST00000358278 SRA1Q9HD15 236 aaKnown RBP13.41□□□□□ -0.26
TPM1-206ENST00000358278 NDRG4Q9ULP0 352 aaKnown RBP13.41□□□□□ -0.26
TPM1-206ENST00000358278 HEATR1Q9H583 2144 aaKnown RBP13.41□□□□□ -0.26
TPM1-206ENST00000358278 ICE1Q9Y2F5 2266 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 A0A1W2PPL8 197 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 H0YJX3 145 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 TLX2O43763 284 aaPredicted RBP13.4□□□□□ -0.26
TPM1-206ENST00000358278 KHDRBS3O75525 346 aaKnown RBP13.4□□□□□ -0.26
TPM1-206ENST00000358278 SEC14L2O76054 403 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 GYPBP06028 91 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 CENPAP49450 140 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 ZNF133P52736 654 aaPredicted RBP13.4□□□□□ -0.26
TPM1-206ENST00000358278 KEAP1Q14145 624 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 TSC22D1Q15714 1073 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 STK11Q15831 433 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 SFRP5Q5T4F7 317 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 PLBD1Q6P4A8 553 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 SLC25A47Q6Q0C1 308 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 STAC2Q6ZMT1 411 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 CXXC5Q7LFL8 322 aaKnown RBP13.4□□□□□ -0.26
TPM1-206ENST00000358278 CPOQ8IVL8 374 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 OR6V1Q8N148 313 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 PROKR2Q8NFJ6 384 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 IL4I1Q96RQ9 567 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 MED20Q9H944 212 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 SEC61A2Q9H9S3 476 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 HINT3Q9NQE9 182 aaKnown RBP13.4□□□□□ -0.26
TPM1-206ENST00000358278 FKBP7Q9Y680 259 aa13.4□□□□□ -0.26
TPM1-206ENST00000358278 DCTN6O00399 190 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 B4GALT1P15291 398 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 PSMB1P20618 241 aaKnown RBP13.39□□□□□ -0.27
TPM1-206ENST00000358278 HOXC12P31275 282 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 UGT2B10P36537 528 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 CAPGP40121 348 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 HSPA13P48723 471 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 ARF1P84077 181 aaKnown RBP13.39□□□□□ -0.27
TPM1-206ENST00000358278 DBPQ10586 325 aaPredicted RBP13.39□□□□□ -0.27
TPM1-206ENST00000358278 ETFDHQ16134 617 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 OR7E24Q6IFN5 339 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 ZNF813Q6ZN06 617 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 BHLHA15Q7RTS1 189 aaPredicted RBP13.39□□□□□ -0.27
TPM1-206ENST00000358278 DEPDC4Q8N2C3 294 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 OR8J1Q8NGP2 316 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 TMEM163Q8TC26 289 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 DDOQ99489 341 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 HDHD5Q9BXW7 423 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 RACGAP1Q9H0H5 632 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 USP9YO00507 2555 aaPredicted RBP13.39□□□□□ -0.27
TPM1-206ENST00000358278 CLEC18AA5D8T8 446 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 E9PQ18 207 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 H0YAE9 185 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 C16orf97H3BN30 126 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 CLUP10909 449 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 SPI1P17947 270 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 GRNP28799 593 aaKnown RBP13.39□□□□□ -0.27
TPM1-206ENST00000358278 CDAP32320 146 aa13.39□□□□□ -0.27
TPM1-206ENST00000358278 SLC25A1P53007 311 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms