RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SRSF4Q08170 494 aaKnown RBP16.04■□□□□ 0.16
RTN4-204ENST00000357732 TMEM31Q5JXX7 168 aa16.04■□□□□ 0.16
RTN4-204ENST00000357732 TMEM184AQ6ZMB5 413 aa16.04■□□□□ 0.16
RTN4-204ENST00000357732 IQCF2Q8IXL9 164 aa16.04■□□□□ 0.16
RTN4-204ENST00000357732 OR51D1Q8NGF3 324 aa16.04■□□□□ 0.16
RTN4-204ENST00000357732 TRAV18A0A075B6X5 111 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 A0A087WV48 116 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 AKR7A3O95154 331 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 TNFP01375 233 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 CD8AP01732 235 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 CD37P11049 281 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 HPGDP15428 266 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 AKT2P31751 481 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 HSD17B7P56937 341 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 ZNF345Q14585 488 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 GRM7Q14831 915 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 C4orf46Q504U0 113 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 ARMC6Q6NXE6 501 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 FBXO46Q6PJ61 603 aaPredicted RBP16.03■□□□□ 0.16
RTN4-204ENST00000357732 DPY19L4Q7Z388 723 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 SFTPA2Q8IWL1 248 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 ZNF454Q8N9F8 522 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 ZBTB44Q8NCP5 570 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 TSEN15Q8WW01 171 aaKnown RBP16.03■□□□□ 0.16
RTN4-204ENST00000357732 OR8B4Q96RC9 309 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 EPHA6Q9UF33 1036 aa16.03■□□□□ 0.16
RTN4-204ENST00000357732 DCTN6O00399 190 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 SCDO00767 359 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 LINC01565O15544 149 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 ZNF264O43296 627 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 KLF8O95600 359 aaPredicted RBP16.02■□□□□ 0.16
RTN4-204ENST00000357732 KIR3DL2P43630 455 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 SLC6A8P48029 635 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 EGR4Q05215 589 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 SERTAD2Q14140 314 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 C2orf68Q2NKX9 166 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 TEX30Q5JUR7 227 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 GABRG1Q8N1C3 465 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 WDR89Q96FK6 387 aaPredicted RBP16.02■□□□□ 0.16
RTN4-204ENST00000357732 CLDN16Q9Y5I7 305 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 HS3ST3A1Q9Y663 406 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 RANBP2P49792 3224 aaKnown RBP16.02■□□□□ 0.16
RTN4-204ENST00000357732 ATG2AQ2TAZ0 1938 aa16.02■□□□□ 0.16
RTN4-204ENST00000357732 A8MUA0 341 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 TOR1AO14656 332 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 SIX6O95475 246 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 NSA2O95478 260 aaKnown RBP16.02■□□□□ 0.15
RTN4-204ENST00000357732 IL33O95760 270 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 ITGA5P08648 1049 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 FSTP19883 344 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 PGDP52209 483 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 CAPZA1P52907 286 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 TFF2Q03403 129 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 C2orf76Q3KRA6 126 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 WDR38Q5JTN6 314 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 GLT8D1Q68CQ7 371 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 TMEM205Q6UW68 189 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 OR4D10Q8NGI6 311 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 CKLFQ9UBR5 152 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 DOCK8Q8NF50 2099 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 CACNA1IQ9P0X4 2223 aa16.02■□□□□ 0.15
RTN4-204ENST00000357732 A0A0A6YYC8 382 aaPredicted RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 TMEM272A0A1B0GTI8 110 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 I3L1I5 382 aaPredicted RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 CD3DP04234 171 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 IL32P24001 234 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 ROM1Q03395 351 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 PLA2G7Q13093 441 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 DCAF12L2Q5VW00 463 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 MCATQ8IVS2 390 aaKnown RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 ZNF679Q8IYX0 411 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 C7orf61Q8IZ16 206 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 C12orf45Q8N5I9 185 aaPredicted RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 C19orf47Q8N9M1 422 aaKnown RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 ZNF784Q8NCA9 323 aaPredicted RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 RNF128Q8TEB7 428 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 PHYHIPLQ96FC7 376 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 TVP23AA6NH52 213 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 HCRTR1O43613 425 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 F13BP05160 661 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 OR4E1P0C645 316 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 EFNB2P52799 333 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 SRSF5Q13243 272 aaKnown RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 SLC17A1Q14916 467 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 OR51A4Q8NGJ6 313 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 OR10AC1Q8NH08 325 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 SLC37A2Q8TED4 501 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 ZNF587Q96SQ5 575 aaPredicted RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 C1QTNF6Q9BXI9 259 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 ADAM19Q9H013 955 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 FAM60AQ9NP50 221 aa16.01■□□□□ 0.15
RTN4-204ENST00000357732 MRTO4Q9UKD2 239 aaKnown RBP16.01■□□□□ 0.15
RTN4-204ENST00000357732 TMEM82A0PJX8 343 aa16■□□□□ 0.15
RTN4-204ENST00000357732 MEGF11A6BM72 1044 aa16■□□□□ 0.15
RTN4-204ENST00000357732 TMEM200CA6NKL6 621 aa16■□□□□ 0.15
RTN4-204ENST00000357732 H0YC42 278 aa16■□□□□ 0.15
RTN4-204ENST00000357732 CD2P06729 351 aa16■□□□□ 0.15
RTN4-204ENST00000357732 ST6GAL1P15907 406 aa16■□□□□ 0.15
RTN4-204ENST00000357732 CCKBRP32239 447 aa16■□□□□ 0.15
RTN4-204ENST00000357732 RABIFP47224 123 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms