RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 RIMKLAQ8IXN7 391 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 OR13H1Q8NG92 308 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 SLC35A4Q96G79 324 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 MBOAT4Q96T53 435 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 TM7SF3Q9NS93 570 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 TMEM202A6NGA9 273 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF587BE7ETH6 402 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 GMDSO60547 372 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 GLULP15104 373 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 CD1EP15812 388 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 RPS19P39019 145 aaKnown RBP10.79□□□□□ -0.68
COL9A1-202ENST00000357250 CARD18P57730 90 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 DYRK1AQ13627 763 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 OXA1LQ15070 435 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 FAHD1Q6P587 224 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 PRR18Q8N4B5 295 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 OR6C1Q96RD1 312 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 NUDT22Q9BRQ3 303 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 FKRPQ9H9S5 495 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 TAS2R16Q9NYV7 291 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 SLC25A37Q9NYZ2 338 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 PRELID3BQ9Y3B1 194 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 A0A1W2PR48 441 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 OR6C65A6NJZ3 312 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 CTXN2P0C2S0 81 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 CD1CP29017 333 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 CSNK1EP49674 416 aaKnown RBP10.79□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF92Q03936 586 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 Q6ZNB5 142 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 TMEFF1Q8IYR6 380 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 LGI3Q8N145 548 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 ASB13Q8WXK3 278 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 LAT2Q9GZY6 243 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 KCNG2Q9UJ96 466 aa10.79□□□□□ -0.68
COL9A1-202ENST00000357250 KLRC4-KLRK1H3BQV0 150 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 SCAF4O95104 1147 aaKnown RBP10.78□□□□□ -0.68
COL9A1-202ENST00000357250 RAB6AP20340 208 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 KITLGP21583 273 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 SSTR2P30874 369 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ARRB2P32121 409 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 DIO1P49895 249 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 TPMTP51580 245 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 HTR4Q13639 388 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 FCN2Q15485 313 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 STK11Q15831 433 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF511Q8NB15 262 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 BAHD1Q8TBE0 780 aaPredicted RBP10.78□□□□□ -0.68
COL9A1-202ENST00000357250 NANPQ8TBE9 248 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ST8SIA1Q92185 356 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 Q96M85 177 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ABHD6Q9BV23 337 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 C20orf85Q9H1P6 137 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 OR52A5Q9H2C5 316 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF223Q9UK11 482 aaPredicted RBP10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ASB1Q9Y576 335 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 KIR2DS1A0A191URI9 304 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 HSBP1L1C9JCN9 74 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 AGPAT2O15120 278 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ABHD16AO95870 558 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 GIPP09681 153 aaPredicted RBP10.78□□□□□ -0.68
COL9A1-202ENST00000357250 CNR1P21554 472 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 KIR2DS4P43632 304 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 KIR2DS1Q14954 304 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 LPAL2Q16609 132 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ZNF628Q5EBL2 1059 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 GLYATL3Q5SZD4 288 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 NAXDQ8IW45 347 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 UHRF2Q96PU4 802 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 KCNJ15Q99712 375 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 TRAPPC2LQ9UL33 140 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 H7C1C5 153 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 K7ESM1 405 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 FXYD1O00168 92 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 C1QBP02746 253 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 CLDN12P56749 244 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 LCN6P62502 163 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 AADACL3Q5VUY0 350 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 KMT5CQ86Y97 462 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 MORN4Q8NDC4 146 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 LFNGQ8NES3 379 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 IP6K3Q96PC2 410 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 MED18Q9BUE0 208 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 CLEC2DQ9UHP7 191 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 SIT1Q9Y3P8 196 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 PCDHGA1Q9Y5H4 931 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 SULT1C4O75897 302 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 STK17BO94768 372 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 RGS11O94810 467 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 CBX7O95931 251 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 LIPCP11150 499 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 TBPP20226 339 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 CHRNB4P30926 498 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 SDHAP31040 664 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 IKZF1Q13422 519 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 ESCO2Q56NI9 601 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 NKAIN4Q8IVV8 208 aa10.78□□□□□ -0.68
COL9A1-202ENST00000357250 MAML2Q8IZL2 1156 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms