RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ZNF93P35789 620 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 FAM110BQ8TC76 370 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ESAMQ96AP7 390 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 GOLGA2P5Q9HBQ8 144 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ACOXLQ9NUZ1 547 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SPATA6Q9NWH7 488 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 OSER1Q9NX31 292 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 COL22A1Q8NFW1 1626 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 DOCK1Q14185 1865 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LOC102723532A0A0G2JNH3 316 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 TRBV4-1A0A0J9YWV2 114 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CT45A6P0DMU7 189 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CT45A5P0DMU8 189 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CT45A7P0DMV0 189 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 FOLR1P15328 257 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CT45A1Q5HYN5 189 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF551Q7Z340 670 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 DEFB128Q7Z7B8 93 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 Q8IYB0 196 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 DNAJC5GQ8N7S2 189 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CT45A3Q8NHU0 189 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LINC01599Q8WXQ3 324 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 PSMF1Q92530 271 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 NAT6Q93015 286 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ABHD6Q9BV23 337 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SEC11CQ9BY50 192 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 POFUT1Q9H488 388 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 MARCH4Q9P2E8 410 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 C2orf72A6NCS6 295 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 PHOX2AO14813 284 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF749O43361 778 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 STC2O76061 302 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ATXN8OSP0DMR3 200 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 POU3F4P49335 361 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 DAPP51397 102 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 FOXB2Q5VYV0 432 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 BTNL8Q6UX41 500 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF574Q6ZN55 896 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LMNTD1Q8N9Z9 388 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SDR9C7Q8NEX9 313 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 FKRPQ9H9S5 495 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 TMED3Q9Y3Q3 217 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ARGFXA6NJG6 315 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF264O43296 627 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 KCNAB3O43448 404 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 OR1Q1Q15612 314 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 GUK1Q16774 197 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 EML3Q32P44 896 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 C9orf131Q5VYM1 1079 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 F2RL3Q96RI0 385 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 KCNK6Q9Y257 313 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CBY3A6NI87 242 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF217O75362 1048 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SSTR4P31391 388 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SUMO3P55854 103 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 STK11Q15831 433 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 NKPD1Q17RQ9 610 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LSRQ86X29 649 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF100Q8IYN0 542 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ABHD14BQ96IU4 210 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF681Q96N22 645 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 RAB18Q9NP72 206 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ADAMTS5Q9UNA0 930 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ZNRF4Q8WWF5 429 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SHARPINQ9H0F6 387 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 DDX31Q9H8H2 851 aaKnown RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 NWD2Q9ULI1 1742 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 HIDE1A8MVS5 230 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 NPIPB8E9PQR5 432 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ATXN1LP0C7T5 689 aaKnown RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 CD37P11049 281 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ITGB8P26012 769 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 OR8G1Q15617 311 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 ISXQ2M1V0 245 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 IAH1Q2TAA2 248 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 TMEM107Q6UX40 140 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 Q6ZTK2 550 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 LANCL3Q6ZV70 420 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 RIMKLAQ8IXN7 391 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 GJC3Q8NFK1 279 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 RNF208Q9H0X6 261 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 SPANXA1Q9NS26 97 aa6.07□□□□□ -1.44
VPS13B-202ENST00000357162 MCTS1Q9ULC4 181 aaKnown RBP6.07□□□□□ -1.44
VPS13B-202ENST00000357162 A0A087WUU8 490 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 NSA2O95478 260 aaKnown RBP6.06□□□□□ -1.44
VPS13B-202ENST00000357162 LIMK1P53667 647 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 PRDX1Q06830 199 aaKnown RBP6.06□□□□□ -1.44
VPS13B-202ENST00000357162 PTX4Q96A99 478 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 PUS1Q9Y606 427 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS13B-202ENST00000357162 PPP1R3DO95685 299 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF534Q76KX8 674 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 RPUSD4Q96CM3 377 aaKnown RBP6.06□□□□□ -1.44
VPS13B-202ENST00000357162 FOXJ3Q9UPW0 622 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 A6NLC8 198 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF728P0DKX0 622 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 SSX1Q16384 188 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 AANATQ16613 207 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 HNRNPA1L2Q32P51 320 aaKnown RBP6.06□□□□□ -1.44
VPS13B-202ENST00000357162 FBXO48Q5FWF7 155 aa6.06□□□□□ -1.44
VPS13B-202ENST00000357162 SDHAF4Q5VUM1 108 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms