RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 KCNG3Q8TAE7 436 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 UBQLN4Q9NRR5 601 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 NPIPB15A6NHN6 443 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 SYT5O00445 386 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 CA3P07451 260 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ICAM2P13598 275 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 RPS19P39019 145 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 PMPCAQ10713 525 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 KIR2DS3Q14952 304 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 TBC1D28Q2M2D7 210 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.63□□□□□ -0.716e-9■■■■■ 39.2
SPTBN1-202ENST00000356805 PRSS42Q7Z5A4 293 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF778Q96MU6 729 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ATF6BQ99941 703 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 MUTYHQ9UIF7 546 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ANTXRLA6NF34 631 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 EDN1P05305 212 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 MLF1P58340 268 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 UBE2IP63279 158 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 MRPL2Q5T653 305 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 C19orf35Q6ZS72 473 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 TOLLIPQ9H0E2 274 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 DDAH2O95865 285 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 BLVRBP30043 206 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 CD81P60033 236 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 FAM26DQ5JW98 314 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 LCTLQ6UWM7 567 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 USP51Q70EK9 711 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 OR13C2Q8NGS9 318 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ACPTQ9BZG2 426 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 HEYLQ9NQ87 328 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 NDUFB11Q9NX14 153 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 SRPK3Q9UPE1 567 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 GAB2Q9UQC2 676 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 SNED1Q8TER0 1413 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 KIR2DL3P43628 341 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 WDR5BQ86VZ2 330 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 TMEFF1Q8IYR6 380 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 LGALS14Q8TCE9 139 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 CXCL12P48061 93 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 HTR6P50406 440 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF239Q16600 458 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 SMN1Q16637 294 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 Q1RN00 199 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 LRP10Q7Z4F1 713 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ADIPOR2Q86V24 386 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 NECAP1Q8NC96 275 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ZBTB44Q8NCP5 570 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ATOH8Q96SQ7 321 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ADAM29Q9UKF5 820 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 RGPD2P0DJD1 1756 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 KCNK5O95279 499 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 TAZQ16635 292 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 C5orf46Q6UWT4 87 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 FRMD1Q8N878 549 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 KDF1Q8NAX2 398 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 GNPNAT1Q96EK6 184 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF583Q96ND8 569 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 WDR83Q9BRX9 315 aaKnown RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 TAF9BQ9HBM6 251 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 OBP2AQ9NY56 170 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 BOLA1Q9Y3E2 137 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 TMEM235A6NFC5 223 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 C4orf47A7E2U8 309 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 ABHD16AO95870 558 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 CALCBP10092 127 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 RAG2P55895 527 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 SLC7A9P82251 487 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 PDZD11Q5EBL8 140 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 ARRDC3Q96B67 414 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 TRAPPC4Q9Y296 219 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 FAM96BQ9Y3D0 163 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 GABRR3A8MPY1 467 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 DEGS1O15121 323 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 CLDN12P56749 244 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 THNSL2Q86YJ6 484 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 BHLHE23Q8NDY6 225 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 DDOQ99489 341 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 TAAR2Q9P1P5 351 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 PIGLQ9Y2B2 252 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 SPINT2O43291 252 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 HMGN2P05204 90 aaKnown RBP10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 FABP1P07148 127 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 BMPR1AP36894 532 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 UBE2G1P62253 170 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 C1orf220Q5T0J3 134 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 TEX261Q6UWH6 196 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 H2BFWTQ7Z2G1 175 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 OR5AS1Q8N127 324 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 TTC9BQ8N6N2 239 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 NPWQ8N729 165 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 TMPRSS5Q9H3S3 457 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 B3GAT1Q9P2W7 334 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 ENTPD2Q9Y5L3 495 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 U3KQ87 197 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 WNT11O96014 354 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 ALDOCP09972 364 aaKnown RBP10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 ITGB7P26010 798 aa10.62□□□□□ -0.71
SPTBN1-202ENST00000356805 PSMB5P28074 263 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms