RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 SELENOPP49908 381 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 RPS11P62280 158 aaKnown RBP eCLIP12.4□□□□□ -0.42
LSS-201ENST00000356396 EIF2B1Q14232 305 aaKnown RBP12.4□□□□□ -0.42
LSS-201ENST00000356396 NTRK2Q16620 822 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 SFRP4Q6FHJ7 346 aaPredicted RBP12.4□□□□□ -0.42
LSS-201ENST00000356396 FAAP20Q6NZ36 180 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 CARFQ8N187 725 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 TMEM43Q9BTV4 400 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 LRFN1Q9P244 771 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 EMC9Q9Y3B6 208 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 ZFYVE26Q68DK2 2539 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 PIEZO1Q92508 2521 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 A0A0J9YW62 118 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 ANKUB1A6NFN9 424 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 ZIC3O60481 467 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 FTH1P19P0C7X4 201 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 CD96P40200 585 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 DDI2Q5TDH0 399 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 GALNTL5Q7Z4T8 443 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 DTX1Q86Y01 620 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 ZNF440Q8IYI8 595 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 PLPP7Q8NBV4 271 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 ALKBH3Q96Q83 286 aaPredicted RBP12.4□□□□□ -0.42
LSS-201ENST00000356396 STRADBQ9C0K7 418 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 POLR1DQ9Y2S0 133 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 PTPRQQ9UMZ3 2332 aa12.4□□□□□ -0.42
LSS-201ENST00000356396 A0A075B6Q4 140 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 A0A1W2PQ09 198 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 RENP00797 406 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 ATF1P18846 271 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 GDF1P27539 372 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 CCL11P51671 97 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 SGCAQ16586 387 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 CEP78Q5JTW2 689 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 ALKBH2Q6NS38 261 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 ZNF517Q6ZMY9 492 aaPredicted RBP12.39□□□□□ -0.43
LSS-201ENST00000356396 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 NRARPQ7Z6K4 114 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 PLCZ1Q86YW0 608 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 PRSS35Q8N3Z0 413 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 ABHD3Q8WU67 409 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 MICU1Q9BPX6 476 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 NMNAT2Q9BZQ4 307 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
LSS-201ENST00000356396 V9GYH0 126 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 PKDREJQ9NTG1 2253 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 LIPT2A6NK58 231 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 OR6C76A6NM76 312 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 CXCL13O43927 109 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 HLA-DPB1P04440 258 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 ZNF806P0C7X5 589 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 SLC6A8P48029 635 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 AGFG1P52594 562 aaKnown RBP12.39□□□□□ -0.43
LSS-201ENST00000356396 FOXG1P55316 489 aaPredicted RBP12.39□□□□□ -0.43
LSS-201ENST00000356396 SGCBQ16585 318 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 TIMM50Q3ZCQ8 353 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 ZNF676Q8N7Q3 588 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 OR51A2Q8NGJ7 313 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 INTS14Q96SY0 518 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 ATF6BQ99941 703 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 WACQ9BTA9 647 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 DEFB127Q9H1M4 99 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 SLC6A15Q9H2J7 730 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 EXOSC3Q9NQT5 275 aaKnown RBP12.39□□□□□ -0.43
LSS-201ENST00000356396 GSTK1Q9Y2Q3 226 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 HNRNPCP07910 306 aaKnown RBP eCLIP12.39□□□□□ -0.433e-7■□□□□ 8.9
LSS-201ENST00000356396 MAGEA5P43359 124 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 PSPHP78330 225 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 TEKQ02763 1124 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 EXD3Q8N9H8 876 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 PRSS33Q8NF86 280 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 TAAR9Q96RI9 348 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 ABHD6Q9BV23 337 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 MMP27Q9H306 513 aa12.39□□□□□ -0.43
LSS-201ENST00000356396 A0A1W2PQ72 361 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 ARPC3O15145 178 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 DBHP09172 617 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 CD3GP09693 182 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 CDK5R1Q15078 307 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 IGFBP7Q16270 282 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 WDR38Q5JTN6 314 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 YOD1Q5VVQ6 348 aaPredicted RBP12.38□□□□□ -0.43
LSS-201ENST00000356396 H1FNTQ75WM6 255 aaPredicted RBP12.38□□□□□ -0.43
LSS-201ENST00000356396 NUP54Q7Z3B4 507 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 COMMD2Q86X83 199 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 ZNF248Q8NDW4 579 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 NKD1Q969G9 470 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
LSS-201ENST00000356396 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 SLC26A1Q9H2B4 701 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 ASH2LQ9UBL3 628 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 CGGBP1Q9UFW8 167 aaPredicted RBP12.38□□□□□ -0.43
LSS-201ENST00000356396 ELF5Q9UKW6 265 aaPredicted RBP12.38□□□□□ -0.43
LSS-201ENST00000356396 TNRC6AQ8NDV7 1962 aaKnown RBP12.38□□□□□ -0.43
LSS-201ENST00000356396 DCDC2BA2VCK2 349 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 E9PLN8 166 aa12.38□□□□□ -0.43
LSS-201ENST00000356396 RGS9O75916 674 aaPredicted RBP12.38□□□□□ -0.43
LSS-201ENST00000356396 TMED10P49755 219 aaKnown RBP12.38□□□□□ -0.43
LSS-201ENST00000356396 EFR3AQ14156 821 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms