RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 FGF20Q9NP95 211 aaPredicted RBP21.31■■□□□ 1
CHKA-202ENST00000356135 VSX1Q9NZR4 365 aaPredicted RBP21.31■■□□□ 1
CHKA-202ENST00000356135 FIGNL2A6NMB9 653 aa21.31■■□□□ 1
CHKA-202ENST00000356135 M0R3G1 203 aa21.31■■□□□ 1
CHKA-202ENST00000356135 PRRG2O14669 202 aa21.31■■□□□ 1
CHKA-202ENST00000356135 RAB36O95755 333 aa21.31■■□□□ 1
CHKA-202ENST00000356135 PTHP01270 115 aa21.31■■□□□ 1
CHKA-202ENST00000356135 FCGR2AP12318 317 aa21.31■■□□□ 1
CHKA-202ENST00000356135 CLRN1P58418 232 aa21.31■■□□□ 1
CHKA-202ENST00000356135 C1orf185Q5T7R7 199 aa21.31■■□□□ 1
CHKA-202ENST00000356135 ZNF367Q7RTV3 350 aa21.31■■□□□ 1
CHKA-202ENST00000356135 TMEM123Q8N131 208 aa21.31■■□□□ 1
CHKA-202ENST00000356135 NMD3Q96D46 503 aaKnown RBP21.31■■□□□ 1
CHKA-202ENST00000356135 ADAD1Q96M93 576 aaKnown RBP21.31■■□□□ 1
CHKA-202ENST00000356135 NMNAT2Q9BZQ4 307 aa21.31■■□□□ 1
CHKA-202ENST00000356135 YIPF3Q9GZM5 350 aa21.31■■□□□ 1
CHKA-202ENST00000356135 TAS2R16Q9NYV7 291 aa21.31■■□□□ 1
CHKA-202ENST00000356135 WARS2Q9UGM6 360 aaKnown RBP21.31■■□□□ 1
CHKA-202ENST00000356135 CD8B2A6NJW9 211 aa21.3■■□□□ 1
CHKA-202ENST00000356135 ZNF724A8MTY0 619 aa21.3■■□□□ 1
CHKA-202ENST00000356135 GPR171O14626 319 aa21.3■■□□□ 1
CHKA-202ENST00000356135 TOXO94900 526 aa21.3■■□□□ 1
CHKA-202ENST00000356135 IGHG1P01857 330 aa21.3■■□□□ 1
CHKA-202ENST00000356135 PAICSP22234 425 aaKnown RBP21.3■■□□□ 1
CHKA-202ENST00000356135 PYCR1P32322 319 aa21.3■■□□□ 1
CHKA-202ENST00000356135 FAM205BPQ63HN1 556 aa21.3■■□□□ 1
CHKA-202ENST00000356135 INTS12Q96CB8 462 aaKnown RBP21.3■■□□□ 1
CHKA-202ENST00000356135 FOXN4Q96NZ1 517 aa21.3■■□□□ 1
CHKA-202ENST00000356135 PTTG2Q9NZH5 202 aa21.3■■□□□ 1
CHKA-202ENST00000356135 H2AFY2Q9P0M6 372 aaPredicted RBP21.3■■□□□ 1
CHKA-202ENST00000356135 SLC16A7O60669 478 aa21.29■■□□□ 1
CHKA-202ENST00000356135 GPANK1O95872 356 aa21.29■■□□□ 1
CHKA-202ENST00000356135 CTLA4P16410 223 aa21.29■■□□□ 1
CHKA-202ENST00000356135 SPI1P17947 270 aa21.29■■□□□ 1
CHKA-202ENST00000356135 FOXF2Q12947 444 aa21.29■■□□□ 1
CHKA-202ENST00000356135 RAB2BQ8WUD1 216 aa21.29■■□□□ 1
CHKA-202ENST00000356135 C12orf43Q96C57 262 aaKnown RBP21.29■■□□□ 1
CHKA-202ENST00000356135 YIPF6Q96EC8 236 aa21.29■■□□□ 1
CHKA-202ENST00000356135 FUNDC2Q9BWH2 189 aa21.29■■□□□ 1
CHKA-202ENST00000356135 NAA50Q9GZZ1 169 aaKnown RBP21.29■■□□□ 1
CHKA-202ENST00000356135 EMC3Q9P0I2 261 aa21.29■■□□□ 1
CHKA-202ENST00000356135 MRPL33O75394 65 aaKnown RBP21.28■■□□□ 1
CHKA-202ENST00000356135 IGHV3-9P01782 118 aa21.28■■□□□ 1
CHKA-202ENST00000356135 SLC2A5P22732 501 aa21.28■■□□□ 1
CHKA-202ENST00000356135 AGTR1P30556 359 aa21.28■■□□□ 1
CHKA-202ENST00000356135 RBPJQ06330 500 aa21.28■■□□□ 1
CHKA-202ENST00000356135 TMED1Q13445 227 aa21.28■■□□□ 1
CHKA-202ENST00000356135 LYPD4Q6UWN0 246 aa21.28■■□□□ 1
CHKA-202ENST00000356135 B3GNT6Q6ZMB0 384 aa21.28■■□□□ 1
CHKA-202ENST00000356135 NOXO1Q8NFA2 376 aa21.28■■□□□ 1
CHKA-202ENST00000356135 NSMAFQ92636 917 aa21.28■■□□□ 1
CHKA-202ENST00000356135 TMEM45BQ96B21 275 aa21.28■■□□□ 1
CHKA-202ENST00000356135 GMPPAQ96IJ6 420 aaPredicted RBP21.28■■□□□ 1
CHKA-202ENST00000356135 C12orf49Q9H741 205 aa21.28■■□□□ 1
CHKA-202ENST00000356135 B9D1Q9UPM9 204 aa21.28■■□□□ 1
CHKA-202ENST00000356135 SMG1Q96Q15 3661 aaKnown RBP21.28■■□□□ 1
CHKA-202ENST00000356135 H3BMQ9 156 aa21.28■■□□□ 1
CHKA-202ENST00000356135 NOL3O60936 208 aaKnown RBP21.28■■□□□ 1
CHKA-202ENST00000356135 UPK3AO75631 287 aa21.28■■□□□ 1
CHKA-202ENST00000356135 GSTT1P30711 240 aa21.28■■□□□ 1
CHKA-202ENST00000356135 SLC25A1P53007 311 aa21.28■■□□□ 1
CHKA-202ENST00000356135 RPS7P62081 194 aaKnown RBP21.28■■□□□ 1
CHKA-202ENST00000356135 SIRPAP78324 504 aa21.28■■□□□ 1
CHKA-202ENST00000356135 SF3B4Q15427 424 aaKnown RBP eCLIP21.28■■□□□ 19e-12■■■■■ 43.6
CHKA-202ENST00000356135 OTPQ5XKR4 325 aa21.28■■□□□ 1
CHKA-202ENST00000356135 LRFN4Q6PJG9 635 aa21.28■■□□□ 1
CHKA-202ENST00000356135 MEPCEQ7L2J0 689 aaKnown RBP21.28■■□□□ 1
CHKA-202ENST00000356135 ANKRD13BQ86YJ7 626 aa21.28■■□□□ 1
CHKA-202ENST00000356135 ST6GALNAC3Q8NDV1 305 aa21.28■■□□□ 1
CHKA-202ENST00000356135 OR6N1Q8NGY5 312 aa21.28■■□□□ 1
CHKA-202ENST00000356135 TMEM54Q969K7 222 aa21.28■■□□□ 1
CHKA-202ENST00000356135 COG8Q96MW5 612 aa21.28■■□□□ 1
CHKA-202ENST00000356135 TEAD3Q99594 435 aa21.28■■□□□ 1
CHKA-202ENST00000356135 TP63Q9H3D4 680 aaPredicted RBP21.28■■□□□ 1
CHKA-202ENST00000356135 ENPP5Q9UJA9 477 aa21.28■■□□□ 1
CHKA-202ENST00000356135 RCE1Q9Y256 329 aa21.28■■□□□ 1
CHKA-202ENST00000356135 ERGIC3Q9Y282 383 aa21.28■■□□□ 1
CHKA-202ENST00000356135 EXOGQ9Y2C4 368 aaKnown RBP21.28■■□□□ 1
CHKA-202ENST00000356135 LSM2Q9Y333 95 aaKnown RBP21.28■■□□□ 1
CHKA-202ENST00000356135 MBD3L4A6NDZ8 208 aaPredicted RBP21.27■■□□□ 1
CHKA-202ENST00000356135 MBD3L3A6NE82 208 aaPredicted RBP21.27■■□□□ 1
CHKA-202ENST00000356135 CCDC182A6NF36 153 aa21.27■■□□□ 1
CHKA-202ENST00000356135 TRIM64BA6NI03 449 aa21.27■■□□□ 1
CHKA-202ENST00000356135 MBD3L5A6NJ08 208 aaPredicted RBP21.27■■□□□ 1
CHKA-202ENST00000356135 SS18L1O75177 396 aaPredicted RBP21.27■■□□□ 1
CHKA-202ENST00000356135 APOL3O95236 402 aa21.27■■□□□ 1
CHKA-202ENST00000356135 QDPRP09417 244 aa21.27■■□□□ 1
CHKA-202ENST00000356135 PTGER4P35408 488 aa21.27■■□□□ 1
CHKA-202ENST00000356135 CSNK1A1P48729 337 aa21.27■■□□□ 1
CHKA-202ENST00000356135 HIST3H3Q16695 136 aa21.27■■□□□ 1
CHKA-202ENST00000356135 TIGD6Q17RP2 521 aa21.27■■□□□ 1
CHKA-202ENST00000356135 NCCRP1Q6ZVX7 275 aaPredicted RBP21.27■■□□□ 1
CHKA-202ENST00000356135 HDDC2Q7Z4H3 204 aa21.27■■□□□ 1
CHKA-202ENST00000356135 C20orf196Q8IYI0 205 aa21.27■■□□□ 1
CHKA-202ENST00000356135 MBD3L2Q8NHZ7 208 aaPredicted RBP21.27■■□□□ 1
CHKA-202ENST00000356135 MCHR2Q969V1 340 aa21.27■■□□□ 1
CHKA-202ENST00000356135 RBP7Q96R05 134 aa21.27■■□□□ 1
CHKA-202ENST00000356135 SNX18Q96RF0 628 aa21.27■■□□□ 1
CHKA-202ENST00000356135 BCL7BQ9BQE9 202 aa21.27■■□□□ 1
CHKA-202ENST00000356135 MND1Q9BWT6 205 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms