RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 C1QTNF12Q5T7M4 302 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 PAQR6Q6TCH4 344 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 AMIGO3Q86WK7 504 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 NAXDQ8IW45 347 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 TSLPQ969D9 159 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 ATF6BQ99941 703 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 PARP12Q9H0J9 701 aaKnown RBP11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 MED9Q9NWA0 146 aa11.72□□□□□ -0.53
SYNCRIP-201ENST00000355238 H7C1C5 153 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 TGM5O43548 720 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 MEOX2P50222 304 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 MOGAT2Q3SYC2 334 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 SH2D5Q6ZV89 423 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 GTF2H5Q6ZYL4 71 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 SYS1Q8N2H4 156 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 GALNT16Q8N428 558 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 SIGLECL1Q8N7X8 197 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 LYSMD1Q96S90 227 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 FGF20Q9NP95 211 aaPredicted RBP11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 SELENOFO60613 162 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 SOD1P00441 154 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 CHRM4P08173 479 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 ACHEP22303 614 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 RPL12P30050 165 aaKnown RBP11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 REEP5Q00765 189 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR5M10Q6IEU7 315 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF765Q7L2R6 523 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 CMTM4Q8IZR5 234 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 TTC9BQ8N6N2 239 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM40Q8WWA1 233 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 FGGYQ96C11 551 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 WDFY2Q96P53 400 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 HSFX1Q9UBD0 423 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR14J1Q9UGF5 321 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 GALR3O60755 368 aaPredicted RBP11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 TOX4O94842 621 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 S100A7P31151 101 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 ARRB2P32121 409 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 YOD1Q5VVQ6 348 aaPredicted RBP11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR51I2Q9H344 312 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 MYOTQ9UBF9 498 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 CROCCQ5TZA2 2017 aa11.71□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF727A8MUV8 499 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 E5RGE8 158 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF354AO60765 605 aaPredicted RBP11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 EDN1P05305 212 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 CD79AP11912 226 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 GLCCI1Q86VQ1 547 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMEM99Q8N816 258 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF485Q8NCK3 441 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR4D10Q8NGI6 311 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 SMIM4Q8WVI0 70 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 PDXPQ96GD0 296 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 NSG2Q9Y328 171 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 TCRBV21S2A2A0A5A6 115 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 RGS13O14921 159 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 SUSD5O60279 629 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 PSMB5P28074 263 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 HAGHQ16775 308 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 GLIPR1L1Q6UWM5 242 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMEM207Q6UWW9 146 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 PGBD5Q8N414 524 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF511Q8NB15 262 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR8U1Q8NH10 309 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 APOOQ9BUR5 198 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 RHOFQ9HBH0 211 aa11.71□□□□□ -0.54
SYNCRIP-201ENST00000355238 DOC2BQ14184 412 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 FAM74A1Q5RGS3 127 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 ACSM5Q6NUN0 579 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMEM71Q6P5X7 295 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 SMIM14Q96QK8 99 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 CMC2Q9NRP2 79 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLC25A37Q9NYZ2 338 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 GJB3O75712 270 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 OLFM2O95897 454 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 HOXC13P31276 330 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 CSF2RBP32927 897 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 DUSP3P51452 185 aaPredicted RBP11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 MFSD4AQ8N468 514 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 DMBX1Q8NFW5 382 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 TVP23CQ96ET8 276 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 ULBP2Q9BZM5 246 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 LTB4R2Q9NPC1 389 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 CCDC88AQ3V6T2 1871 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 RFPL4AA6NLU0 287 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 IFITM5A6NNB3 132 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 RFPL4AL1F8VTS6 287 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 PTGER4P35408 488 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 SOX18P35713 384 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 RAG2P55895 527 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLC10A1Q14973 349 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 PLGLAQ15195 96 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 ACOXLQ9NUZ1 547 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 A8MVM7 634 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 NPBWR1P48145 328 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 RAB38P57729 211 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 XAF1Q6GPH4 301 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 BTLAQ7Z6A9 289 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms