RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SNX32Q86XE0 403 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 TREML1Q86YW5 311 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 SLC30A7Q8NEW0 376 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 OR4K5Q8NGD3 323 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 TSPEARQ8WU66 669 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 ZNF566Q969W8 418 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 ZNF347Q96SE7 839 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 MRPL13Q9BYD1 178 aaKnown RBP13.55□□□□□ -0.24
PDGFA-201ENST00000354513 OR51B6Q9H340 312 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 KAT8Q9H7Z6 458 aaKnown RBP13.55□□□□□ -0.24
PDGFA-201ENST00000354513 NANSQ9NR45 359 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 HIF1ANQ9NWT6 349 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 DUSP13Q9UII6 198 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 LEF1Q9UJU2 399 aaPredicted RBP13.55□□□□□ -0.24
PDGFA-201ENST00000354513 ZNF229Q9UJW7 825 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 ARHGAP32A7KAX9 2087 aa13.55□□□□□ -0.24
PDGFA-201ENST00000354513 LOC100653049A0A140TA62 436 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 A0A1W2PPW3 197 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 TRAPPC13A5PLN9 417 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 C17orf100A8MU93 164 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 ANGPT2O15123 496 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 KRT34O76011 436 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 SNAP29O95721 258 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 AVPP01185 164 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 TFP02787 698 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 MSMBP08118 114 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 QDPRP09417 244 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 ZNF133P52736 654 aaPredicted RBP13.54□□□□□ -0.24
PDGFA-201ENST00000354513 UGT2B15P54855 530 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 MYBPC1Q00872 1141 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 RGS7BPQ6MZT1 257 aaPredicted RBP13.54□□□□□ -0.24
PDGFA-201ENST00000354513 TTC33Q6PID6 262 aaPredicted RBP13.54□□□□□ -0.24
PDGFA-201ENST00000354513 UGT2A3Q6UWM9 527 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 POU5F2Q8N7G0 328 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 NOXO1Q8NFA2 376 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 ASB10Q8WXI3 467 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 MCHR2Q969V1 340 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 METTL17Q9H7H0 456 aaPredicted RBP13.54□□□□□ -0.24
PDGFA-201ENST00000354513 G6PC2Q9NQR9 355 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 TAAR3PQ9P1P4 343 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 NDUFAF1Q9Y375 327 aa13.54□□□□□ -0.24
PDGFA-201ENST00000354513 IGKV1D-43A0A0B4J1Z2 117 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 RNF13O43567 381 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 DEAF1O75398 565 aaPredicted RBP13.53□□□□□ -0.24
PDGFA-201ENST00000354513 OR6A2O95222 327 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 TSPAN19P0C672 248 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 COX4I1P13073 169 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 TNFRSF1BP20333 461 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 RPL18Q07020 188 aaKnown RBP13.53□□□□□ -0.24
PDGFA-201ENST00000354513 MMEL1Q495T6 779 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 NKAIN4Q8IVV8 208 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 FITM2Q8N6M3 262 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 RP9Q8TA86 221 aaKnown RBP13.53□□□□□ -0.24
PDGFA-201ENST00000354513 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
PDGFA-201ENST00000354513 SLC19A3Q9BZV2 496 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 ZNF346Q9UL40 294 aaKnown RBP13.53□□□□□ -0.24
PDGFA-201ENST00000354513 UGT2A1Q9Y4X1 527 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 CACNG2Q9Y698 323 aa13.53□□□□□ -0.24
PDGFA-201ENST00000354513 BBIP1A8MTZ0 92 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 FBP2O00757 339 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 PPIHO43447 177 aaKnown RBP13.52□□□□□ -0.25
PDGFA-201ENST00000354513 MGRN1O60291 552 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 CDC14BO60729 498 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.25
PDGFA-201ENST00000354513 F13BP05160 661 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 PRDX6P30041 224 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 TMEM33P57088 247 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 CCL8P80075 99 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 HNRNPA0Q13151 305 aaKnown RBP13.52□□□□□ -0.25
PDGFA-201ENST00000354513 NKPD1Q17RQ9 610 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 AVPI1Q5T686 147 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 REP15Q6BDI9 236 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 CCDC80Q76M96 950 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 NANOGNBQ7Z5D8 188 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 PATL1Q86TB9 770 aaKnown RBP13.52□□□□□ -0.25
PDGFA-201ENST00000354513 CPEB3Q8NE35 698 aaKnown RBP13.52□□□□□ -0.25
PDGFA-201ENST00000354513 OR10A6Q8NH74 314 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 NABP1Q96AH0 204 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 CMTM5Q96DZ9 223 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 MPP4Q96JB8 637 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 ZNF416Q9BWM5 594 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 HINT3Q9NQE9 182 aaKnown RBP13.52□□□□□ -0.25
PDGFA-201ENST00000354513 C20orf141Q9NUB4 165 aa13.52□□□□□ -0.25
PDGFA-201ENST00000354513 FXYD1O00168 92 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 MRASO14807 208 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 SLC2A10O95528 541 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 IGHG1P01857 330 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 PCMT1P22061 227 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 CFPP27918 469 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 WNT5AP41221 380 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 KLF3P57682 345 aaPredicted RBP13.51□□□□□ -0.25
PDGFA-201ENST00000354513 GLO1Q04760 184 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 NFYCQ13952 458 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 VMACQ2NL98 169 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 NRN1LQ496H8 165 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 C10orf128Q5T292 105 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 ARMC4Q5T2S8 1044 aa13.51□□□□□ -0.25
PDGFA-201ENST00000354513 TMEM53Q6P2H8 277 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms