RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SLC17A2O00624 439 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 CDC40O60508 579 aaKnown RBP eCLIP22.18■■□□□ 1.14
CPNE1-202ENST00000352393 PM20D2Q8IYS1 436 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 C7orf61Q8IZ16 206 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 CLEC1AQ8NC01 280 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 OR8B4Q96RC9 309 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 ELF4Q99607 663 aaPredicted RBP22.18■■□□□ 1.14
CPNE1-202ENST00000352393 SLC17A5Q9NRA2 495 aa22.18■■□□□ 1.14
CPNE1-202ENST00000352393 CDV3Q9UKY7 258 aaKnown RBP22.18■■□□□ 1.14
CPNE1-202ENST00000352393 FXYD6-FXYD2A0A087WZ82 144 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 A8MUA0 341 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 NUP62P37198 522 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-202ENST00000352393 SSBP1Q04837 148 aaKnown RBP22.17■■□□□ 1.14
CPNE1-202ENST00000352393 RAB11BQ15907 218 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 COL13A1Q5TAT6 717 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-202ENST00000352393 ASPHD2Q6ICH7 369 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 FAM166AQ6J272 317 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 KRT77Q7Z794 578 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 COQ8AQ8NI60 647 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 PELOQ9BRX2 385 aaKnown RBP22.17■■□□□ 1.14
CPNE1-202ENST00000352393 ARL6Q9H0F7 186 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 FXYD6Q9H0Q3 95 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 SESN1Q9Y6P5 492 aa22.17■■□□□ 1.14
CPNE1-202ENST00000352393 LOC100289279A0A1B0GTE1 492 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 CDK2AP1O14519 115 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 METTL27Q8N6F8 245 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-202ENST00000352393 FAM3DQ96BQ1 224 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 ADAM19Q9H013 955 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 MED11Q9P086 117 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 A8MXK9 166 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 C17orf105B2RV13 164 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 SEMA4FO95754 770 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 LPLP06858 475 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 PRSS3P35030 304 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 GK2Q14410 553 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-202ENST00000352393 TOMM20Q15388 145 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 TMEM81Q6P7N7 255 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 TSSK4Q6SA08 328 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 GSG1LQ6UXU4 331 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 ZNF321PQ8N8H1 164 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 MMABQ96EY8 250 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-202ENST00000352393 NXF5Q9H1B4 397 aaKnown RBP22.16■■□□□ 1.14
CPNE1-202ENST00000352393 ELOVL3Q9HB03 270 aa22.16■■□□□ 1.14
CPNE1-202ENST00000352393 TMEM184BQ9Y519 407 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-202ENST00000352393 ARPC4-TTLL3A0A0A6YYG9 625 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 MEIS3P1A6NDR6 274 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 WNT11O96014 354 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 BGLAPP02818 100 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 CD3DP04234 171 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 IGHV4-34P06331 123 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 CCKBRP32239 447 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 PTGS2P35354 604 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 C1orf61Q13536 156 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 SERTAD2Q14140 314 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 SLC17A1Q14916 467 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 C2orf76Q3KRA6 126 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 ZNF563Q8TA94 476 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 GPX8Q8TED1 209 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 ASB13Q8WXK3 278 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 ZNF285Q96NJ3 590 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 C1orf198Q9H425 327 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 POM121CA8CG34 1229 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 PRAMEF26H0Y7S4 382 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 FBXO45P0C2W1 286 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 PPICP45877 212 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 SLC37A1P57057 533 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 FZD2Q14332 565 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 MEP1BQ16820 701 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 LHFPL5Q8TAF8 219 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 TNFAIP8L1Q8WVP5 186 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 DPYSL5Q9BPU6 564 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 PBX4Q9BYU1 374 aa22.15■■□□□ 1.14
CPNE1-202ENST00000352393 TDRD6O60522 2096 aaKnown RBP22.14■■□□□ 1.14
CPNE1-202ENST00000352393 SPTY2D1-AS1A0A0U1RR47 76 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 TCRBV21S2A2A0A5A6 115 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 ITGB2P05107 769 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 MELTFP08582 738 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 GABRG2P18507 467 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 MRPS21P82921 87 aaKnown RBP22.14■■□□□ 1.13
CPNE1-202ENST00000352393 UBXN2BQ14CS0 331 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 TUSC1Q2TAM9 212 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 STEAP1BQ6NZ63 245 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 PARGQ86W56 976 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 OR6M1Q8NGM8 313 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 TCTN2Q96GX1 697 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 MAP3K3Q99759 626 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 LAT2Q9GZY6 243 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 SHARPINQ9H0F6 387 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 ALX4Q9H161 411 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-202ENST00000352393 PFDN2Q9UHV9 154 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 CPAMD8Q8IZJ3 1885 aa22.14■■□□□ 1.13
CPNE1-202ENST00000352393 B4DGG1 531 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 KRBOX1C9JBD0 128 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 TRIM77I1YAP6 450 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 AQP8O94778 261 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 GABRA4P48169 554 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 RNF128Q8TEB7 428 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 PTPMT1Q8WUK0 201 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-202ENST00000352393 CHST6Q9GZX3 395 aa22.13■■□□□ 1.13
CPNE1-202ENST00000352393 EXO5Q9H790 373 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms