RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 ZNF136P52737 540 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 TAS2R46P59540 309 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 Q6ZTK2 550 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 CPEB2Q7Z5Q1 589 aaKnown RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 OR6V1Q8N148 313 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 CNRIP1Q96F85 164 aaPredicted RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 SBK2P0C263 348 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 RPL23AP62750 156 aaKnown RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 CAMKMTQ7Z624 323 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 MAML2Q8IZL2 1156 aaPredicted RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 SLC22A24Q8N4F4 322 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 OR52N1Q8NH53 320 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 C1QTNF6Q9BXI9 259 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 LOXL2Q9Y4K0 774 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 MYO5AQ9Y4I1 1855 aaKnown RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 ZNF705FA8MVS1 300 aaPredicted RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 ICOSLGO75144 302 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 UBCP0CG48 685 aaKnown RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 ZNF705DP0CH99 300 aaPredicted RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 ZNF705BP0CI00 300 aaPredicted RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 MSR1P21757 451 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 ISL1P61371 349 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 SNRPGP62308 76 aaKnown RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 LIPNQ5VXI9 398 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 CLDN22Q8N7P3 220 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 OR11L1Q8NGX0 322 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 SECTM1Q8WVN6 248 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 HINT3Q9NQE9 182 aaKnown RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 LRFN1Q9P244 771 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 TMEM82A0PJX8 343 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 SLC2A10O95528 541 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 LPLP06858 475 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 NAT1P18440 290 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 HCCSP53701 268 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 SYT9Q86SS6 491 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 ZC3HAV1LQ96H79 300 aaKnown RBP17.04■□□□□ 0.32
UBE3C-201ENST00000348165 PLA2G2FQ9BZM2 168 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 EMC7Q9NPA0 242 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 MUTYHQ9UIF7 546 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 HRH3Q9Y5N1 445 aa17.04■□□□□ 0.32
UBE3C-201ENST00000348165 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
UBE3C-201ENST00000348165 LMO7DNF2Z398 122 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 GLSO94925 669 aaPredicted RBP17.03■□□□□ 0.32
UBE3C-201ENST00000348165 NXPH2O95156 264 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 DUSP8Q13202 625 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 FAM109BQ6ICB4 259 aaPredicted RBP17.03■□□□□ 0.32
UBE3C-201ENST00000348165 USB1Q9BQ65 265 aaKnown RBP17.03■□□□□ 0.32
UBE3C-201ENST00000348165 WWTR1Q9GZV5 400 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 LIN7BQ9HAP6 207 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 TMEM221A6NGB7 291 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 PCSK6P29122 969 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 HSF1Q00613 529 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 YIF1BQ5BJH7 314 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 SLC35D3Q5M8T2 416 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 HACD4Q5VWC8 232 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 TCTN3Q6NUS6 607 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 SYT13Q7L8C5 426 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 RAB39BQ96DA2 213 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 GALNT9Q9HCQ5 603 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 LANCL2Q9NS86 450 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 PCDHGA5Q9Y5G8 931 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 PSMB1P20618 241 aaKnown RBP17.03■□□□□ 0.32
UBE3C-201ENST00000348165 ACKR1Q16570 336 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 SYT6Q5T7P8 510 aaPredicted RBP17.03■□□□□ 0.32
UBE3C-201ENST00000348165 PGAP1Q75T13 922 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 GIMAP1Q8WWP7 306 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 YBX2Q9Y2T7 364 aaKnown RBP17.03■□□□□ 0.32
UBE3C-201ENST00000348165 RAB19A4D1S5 217 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 DSCR3O14972 297 aa17.03■□□□□ 0.32
UBE3C-201ENST00000348165 HIST1H1CP16403 213 aaKnown RBP17.03■□□□□ 0.32
UBE3C-201ENST00000348165 MT-CO2P00403 227 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 IDH3GP51553 393 aaPredicted RBP17.02■□□□□ 0.32
UBE3C-201ENST00000348165 MAP2K6P52564 334 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 AADACL3Q5VUY0 350 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 FAM3DQ96BQ1 224 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 ZNF419Q96HQ0 510 aaPredicted RBP17.02■□□□□ 0.32
UBE3C-201ENST00000348165 LRRC61Q9BV99 259 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 WSB2Q9NYS7 404 aaPredicted RBP17.02■□□□□ 0.32
UBE3C-201ENST00000348165 CGGBP1Q9UFW8 167 aaPredicted RBP17.02■□□□□ 0.32
UBE3C-201ENST00000348165 GPR55Q9Y2T6 319 aaPredicted RBP17.02■□□□□ 0.32
UBE3C-201ENST00000348165 PRSS44E7EML9 344 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 OR2J2O76002 312 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 RAB4BP61018 213 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 FAM219BQ5XKK7 198 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 STEAP3Q658P3 488 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 BHLHA9Q7RTU4 235 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 ANKRD53Q8N9V6 530 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 OR56B4Q8NH76 319 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 MVB12AQ96EY5 273 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 TMEM100Q9NV29 134 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 SMCHD1A6NHR9 2005 aa17.02■□□□□ 0.32
UBE3C-201ENST00000348165 ZNF705GA8MUZ8 300 aaPredicted RBP17.02■□□□□ 0.31
UBE3C-201ENST00000348165 D6RAR5 112 aa17.02■□□□□ 0.31
UBE3C-201ENST00000348165 SHOXO15266 292 aa17.02■□□□□ 0.31
UBE3C-201ENST00000348165 SOWAHCQ53LP3 525 aaPredicted RBP17.02■□□□□ 0.31
UBE3C-201ENST00000348165 ZNF620Q6ZNG0 422 aa17.02■□□□□ 0.31
UBE3C-201ENST00000348165 CADM3Q8N126 398 aa17.02■□□□□ 0.31
UBE3C-201ENST00000348165 SGK3Q96BR1 496 aa17.02■□□□□ 0.31
UBE3C-201ENST00000348165 CCDC74BQ96LY2 380 aa17.02■□□□□ 0.31
UBE3C-201ENST00000348165 OCEL1Q9H607 264 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms