RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 RPP30P78346 268 aaKnown RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 LTB4RQ15722 352 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 TCTN3Q6NUS6 607 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 BRICD5Q6PL45 260 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 MCATQ8IVS2 390 aaKnown RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 OR5AP2Q8NGF4 316 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 ABI3Q9P2A4 366 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 MYO5AQ9Y4I1 1855 aaKnown RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 A0A087X0M5 115 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 A0A1B0GX30 115 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 BET1O15155 118 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 HOXD9P28356 352 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 CSNK1DP48730 415 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 IFITM2Q01629 132 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 CNN3Q15417 329 aaKnown RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 DEFB110Q30KQ9 67 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 PHLDA2Q53GA4 152 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 GPR137CQ8N3F9 429 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 RXFP4Q8TDU9 374 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF75AQ96N20 296 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 DERL3Q96Q80 235 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 MMP24Q9Y5R2 645 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 V9GYH0 126 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 ANKUB1A6NFN9 424 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 ERVH48-1M5A8F1 160 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 ST8SIA3O43173 380 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 GLCEO94923 617 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 BCKDHBP21953 392 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 PJVKQ0ZLH3 352 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 IHHQ14623 411 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 SLC35D3Q5M8T2 416 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 FAM57BQ71RH2 274 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 COMMD1Q8N668 190 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 NKAIN3Q8N8D7 197 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 GPR119Q8TDV5 335 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 KIRREL1Q96J84 757 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 OR10A2Q9H208 303 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 SLC25A19Q9HC21 320 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 B3GALT5Q9Y2C3 310 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 PARP4Q9UKK3 1724 aaKnown RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 XRCC3O43542 346 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF93P35789 620 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 LIPNQ5VXI9 398 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 LGI3Q8N145 548 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 ZFP62Q8NB50 900 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 OR4C5Q8NGB2 326 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 SECTM1Q8WVN6 248 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 FGGYQ96C11 551 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 GAS2L1Q99501 681 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 NAA11Q9BSU3 229 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 FAM103A1Q9BTL3 118 aaKnown RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 FAM96BQ9Y3D0 163 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 A6NLC8 198 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 H0Y8G0 127 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 RAG2P55895 527 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 OR10A5Q9H207 317 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 LRRC37A3O60309 1634 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 AP4M1O00189 453 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 LRP3O75074 770 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 CTSLP07711 333 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 FCGR2AP12318 317 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 ALOX5APP20292 161 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 BAXQ07812 192 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 MANEAQ5SRI9 462 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 NCMAPQ5T1S8 102 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 RAET1LQ5VY80 246 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 SMIM19Q96E16 107 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 WDR92Q96MX6 357 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 METTL9Q9H1A3 318 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 NAV1Q8NEY1 1877 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 LRP5LA4QPB2 252 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 TP53I11O14683 189 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 C1SP09871 688 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 FGF9P31371 208 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-202ENST00000345356 SMAD2Q15796 467 aaKnown RBP11.13□□□□□ -0.63
COL12A1-202ENST00000345356 TRILQ7L0X0 811 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 TMEM25Q86YD3 366 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 C15orf54Q8N8G6 183 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 CLEC1AQ8NC01 280 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 ADAMTS18Q8TE60 1221 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 WSB2Q9NYS7 404 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-202ENST00000345356 PLEK2Q9NYT0 353 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 MCRIP1C9JLW8 97 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 AADACP22760 399 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 ERVK-16P61578 105 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 SUMO1P63165 101 aaKnown RBP11.13□□□□□ -0.63
COL12A1-202ENST00000345356 CLEC12BQ2HXU8 276 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 NHLRC1Q6VVB1 395 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 TMPRSS7Q7RTY8 843 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-202ENST00000345356 PRSS35Q8N3Z0 413 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 ANKRD9Q96BM1 317 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-202ENST00000345356 ARV1Q9H2C2 271 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 ZCCHC4Q9H5U6 513 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 TAAR2Q9P1P5 351 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 OR52A1Q9UKL2 312 aa11.13□□□□□ -0.63
COL12A1-202ENST00000345356 A0A1W2PQU0 124 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms