RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 FAM69AQ5T7M9 428 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 HES3Q5TGS1 186 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 GPR139Q6DWJ6 353 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 SFXN4Q6P4A7 337 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 GLCCI1Q86VQ1 547 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 ADGRG3Q86Y34 549 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 DND1Q8IYX4 353 aaKnown RBP11.58□□□□□ -0.56
CLK3-201ENST00000345005 SAMD12Q8N8I0 201 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 STK35Q8TDR2 534 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 TAAR8Q969N4 342 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 KTI12Q96EK9 354 aaPredicted RBP11.58□□□□□ -0.56
CLK3-201ENST00000345005 GPX7Q96SL4 187 aaPredicted RBP11.58□□□□□ -0.56
CLK3-201ENST00000345005 ALG8Q9BVK2 526 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 ZFP64Q9NPA5 681 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 NRIP3Q9NQ35 241 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 PPP4R1LQ9P1A2 415 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 CAMK2AQ9UQM7 478 aa11.58□□□□□ -0.56
CLK3-201ENST00000345005 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 IGLV3-32A0A0A0MS00 114 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 SMIM30A4D0T7 59 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 A8MVM7 634 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 NDUFA2O43678 99 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 FZD7O75084 574 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 TSC22D2O75157 780 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 NCR1O76036 304 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 APOL3O95236 402 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 ECDO95905 644 aaPredicted RBP11.57□□□□□ -0.56
CLK3-201ENST00000345005 MT-ATP6P00846 226 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 CD1AP06126 327 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 H2AFB2P0C5Z0 115 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 APOBEC1P41238 236 aaKnown RBP11.57□□□□□ -0.56
CLK3-201ENST00000345005 AGFG1P52594 562 aaKnown RBP11.57□□□□□ -0.56
CLK3-201ENST00000345005 DLX5P56178 289 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 AP3S2P59780 193 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 LTBQ06643 244 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 TOR2AQ5JU69 321 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 FCRLBQ6BAA4 426 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 OR5M10Q6IEU7 315 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 POMZP3Q6PJE2 187 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 ASB18Q6ZVZ8 466 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 FAM98AQ8NCA5 519 aaKnown RBP11.57□□□□□ -0.56
CLK3-201ENST00000345005 OR10G3Q8NGC4 313 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 OR52E2Q8NGJ4 325 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 C15orf40Q8WUR7 153 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 MRPL48Q96GC5 212 aaKnown RBP11.57□□□□□ -0.56
CLK3-201ENST00000345005 MOGAT1Q96PD6 335 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 TEAD3Q99594 435 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 MRI1Q9BV20 369 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 CACNG6Q9BXT2 260 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 GPR87Q9BY21 358 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 FAM117AQ9C073 453 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 NARFLQ9H6Q4 476 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 MED20Q9H944 212 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 ZNF160Q9HCG1 818 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 PARD6AQ9NPB6 346 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 MAB21L2Q9Y586 359 aa11.57□□□□□ -0.56
CLK3-201ENST00000345005 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 A0A1W2PNU3 283 aaPredicted RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 C2orf72A6NCS6 295 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 FAM25EA8MYX2 175 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 IMPA2O14732 288 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 EEF1E1O43324 174 aaKnown RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 ARL6IP5O75915 188 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 BGLAPP02818 100 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 CELA2AP08217 269 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 SULT1A3P0DMM9 295 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 SULT1A4P0DMN0 295 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 APEHP13798 732 aaKnown RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 HIST1H1CP16403 213 aaKnown RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 OTX2P32243 289 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 AQP2P41181 271 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 CRMP1Q14194 572 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 TMEM81Q6P7N7 255 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 KRT74Q7RTS7 529 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 MAMDC2Q7Z304 686 aaPredicted RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 PPP1R32Q7Z5V6 425 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 PXKQ7Z7A4 578 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 RPS19BP1Q86WX3 136 aaKnown RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 NUDT15Q9NV35 164 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 HAO2Q9NYQ3 351 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 MED11Q9P086 117 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 GLS2Q9UI32 602 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 KIF25Q9UIL4 384 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 RASD1Q9Y272 281 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 WIF1Q9Y5W5 379 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 DOCK10Q96BY6 2186 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 SHISA3A0PJX4 238 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 TMEM72A0PK05 275 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 C21orf140B9A014 251 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 OR2T1O43869 369 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 NPIPB7O75200 414 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 SERPINI2O75830 405 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 PAHP00439 452 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 HPP00738 406 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 CD14P08571 375 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 SLC2A5P22732 501 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 DNASE1P24855 282 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 THBS2P35442 1172 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 PTGDSP41222 190 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 SSR4P51571 173 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms