RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SUCLG1P53597 346 aaKnown RBP13.14□□□□□ -0.31
CXCL12-201ENST00000343575 CTXN1P60606 82 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 PPIAP62937 165 aaKnown RBP13.14□□□□□ -0.31
CXCL12-201ENST00000343575 H3F3AP84243 136 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 TAB1Q15750 504 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 H1FNTQ75WM6 255 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-201ENST00000343575 HIST3H2AQ7L7L0 130 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 WDFY1Q8IWB7 410 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 TMEM99Q8N816 258 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 HIST1H2ACQ93077 130 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 Q96M85 177 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 ZNF582Q96NG8 517 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-201ENST00000343575 SLC38A2Q96QD8 506 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 ALKBH4Q9NXW9 302 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 B3GAT1Q9P2W7 334 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 BAIAP2Q9UQB8 552 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 TRAV17A0A0B4J275 112 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 FABP12A6NFH5 140 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 KDM4EB2RXH2 506 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-201ENST00000343575 C11orf98E9PRG8 122 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 TXNDC12O95881 172 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 ITGB2P05107 769 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 APEHP13798 732 aaKnown RBP13.14□□□□□ -0.31
CXCL12-201ENST00000343575 NOS3P29474 1203 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 HTR2BP41595 481 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 AP2S1P53680 142 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-201ENST00000343575 PLGLB1Q02325 96 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 ZP4Q12836 540 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 TBR1Q16650 682 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 PLET1Q6UQ28 207 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 TRILQ7L0X0 811 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 CPOQ8IVL8 374 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 LAX1Q8IWV1 398 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 ELMOD2Q8IZ81 293 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 SPERTQ8NA61 448 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 ZPLD1Q8TCW7 415 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 RASD2Q96D21 266 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 ADGRG7Q96K78 797 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 SFXN2Q96NB2 322 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 TSPAN32Q96QS1 320 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 SLC6A15Q9H2J7 730 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 MED20Q9H944 212 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 ISYNA1Q9NPH2 558 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 FANCFQ9NPI8 374 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 SNTG1Q9NSN8 517 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 B4GALT7Q9UBV7 327 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 NUFIP1Q9UHK0 495 aaKnown RBP13.14□□□□□ -0.31
CXCL12-201ENST00000343575 LIPGQ9Y5X9 500 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 BOD1L1Q8NFC6 3051 aa13.14□□□□□ -0.31
CXCL12-201ENST00000343575 CHD8Q9HCK8 2581 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 ATMQ13315 3056 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 IRGMA1A4Y4 181 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 B8ZZF3 427 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 ICMTO60725 284 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 PMS2P2O95744 297 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 CSF3P09919 207 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 CRMP1Q14194 572 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 ZNF239Q16600 458 aaKnown RBP13.13□□□□□ -0.31
CXCL12-201ENST00000343575 NANOGP1Q8N7R0 232 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 RBMXL3Q8N7X1 1067 aaKnown RBP13.13□□□□□ -0.31
CXCL12-201ENST00000343575 CYB561A3Q8NBI2 242 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 NPEPL1Q8NDH3 523 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 DUSP18Q8NEJ0 188 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 OR4K13Q8NH42 304 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 SMPDL3BQ92485 455 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 KLHL15Q96M94 604 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 C11orf54Q9H0W9 315 aaPredicted RBP13.13□□□□□ -0.31
CXCL12-201ENST00000343575 ZDHHC11Q9H8X9 412 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 ACKR4Q9NPB9 350 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 CHST11Q9NPF2 352 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 TIGARQ9NQ88 270 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 B3GNT2Q9NY97 397 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 ZNF346Q9UL40 294 aaKnown RBP13.13□□□□□ -0.31
CXCL12-201ENST00000343575 B3GALT5Q9Y2C3 310 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 TMA7Q9Y2S6 64 aaKnown RBP13.13□□□□□ -0.31
CXCL12-201ENST00000343575 PCDHGB7Q9Y5F8 929 aa13.13□□□□□ -0.31
CXCL12-201ENST00000343575 A0A087WV48 116 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 MED19A0JLT2 244 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-201ENST00000343575 A8MV72 311 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-201ENST00000343575 ERVH48-1M5A8F1 160 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 SULT2B1O00204 365 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 TNFSF11O14788 317 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 TFECO14948 347 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-201ENST00000343575 SHOXO15266 292 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 AHCYP23526 432 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 CDKN2AP42771 156 aaKnown RBP13.12□□□□□ -0.31
CXCL12-201ENST00000343575 LHX2P50458 406 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 PPP3R1P63098 170 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 PUDPQ08623 228 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 ESCO2Q56NI9 601 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 MESTQ5EB52 335 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 CEP78Q5JTW2 689 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 PLBD1Q6P4A8 553 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 ARHGAP11AQ6P4F7 1023 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 IDO2Q6ZQW0 420 aa13.12□□□□□ -0.31
CXCL12-201ENST00000343575 Q6ZS92 163 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms