RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 NDRG3Q9UGV2 375 aa16.47■□□□□ 0.23
CDHR4-201ENST00000343366 ADAM18Q9Y3Q7 739 aa16.47■□□□□ 0.23
CDHR4-201ENST00000343366 FREM1Q5H8C1 2179 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 PRSS37A4D1T9 235 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 CASQ2O14958 399 aaPredicted RBP16.46■□□□□ 0.23
CDHR4-201ENST00000343366 ARHGEF9O43307 516 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 SOX14O95416 240 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 PPP1R3DO95685 299 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 RENP00797 406 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 TP53P04637 393 aaPredicted RBP16.46■□□□□ 0.23
CDHR4-201ENST00000343366 IL32P24001 234 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 CRABP1P29762 137 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 GRK5P34947 590 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 UGT2B10P36537 528 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 ZNF84P51523 738 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 CDK5Q00535 292 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 ROR2Q01974 943 aaKnown RBP16.46■□□□□ 0.23
CDHR4-201ENST00000343366 CD47Q08722 323 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 CLEC12AQ5QGZ9 265 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 CARD17Q5XLA6 110 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 DNM1P34Q6PK57 102 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 Q96M85 177 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 SLC25A19Q9HC21 320 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 CRLF2Q9HC73 371 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 GPR35Q9HC97 309 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 VSX1Q9NZR4 365 aaPredicted RBP16.46■□□□□ 0.23
CDHR4-201ENST00000343366 IL20RAQ9UHF4 553 aa16.46■□□□□ 0.23
CDHR4-201ENST00000343366 TEX13CA0A0J9YWL9 993 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 CIB4A0PJX0 185 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 ZNF99A8MXY4 864 aaPredicted RBP16.45■□□□□ 0.22
CDHR4-201ENST00000343366 M0R3G1 203 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 EI24O14681 340 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 UPK3AO75631 287 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 IGHV1-2P23083 117 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 POU1F1P28069 291 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 HOXC12P31275 282 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 SLC34A1Q06495 639 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 TRIP10Q15642 601 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 PGGHGQ32M88 737 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 MESTQ5EB52 335 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 C10orf128Q5T292 105 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 STAC2Q6ZMT1 411 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 ZNF627Q7L945 461 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 CXorf67Q86X51 503 aaPredicted RBP16.45■□□□□ 0.22
CDHR4-201ENST00000343366 CBR4Q8N4T8 237 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 ZNF433Q8N7K0 673 aaPredicted RBP16.45■□□□□ 0.22
CDHR4-201ENST00000343366 HDAC2Q92769 488 aaKnown RBP16.45■□□□□ 0.22
CDHR4-201ENST00000343366 ALKBH3Q96Q83 286 aaPredicted RBP16.45■□□□□ 0.22
CDHR4-201ENST00000343366 SLC38A2Q96QD8 506 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 GABARAPL3Q9BY60 117 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 PLA2G12AQ9BZM1 189 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 VCX3BQ9H321 246 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 OBP2BQ9NPH6 170 aa16.45■□□□□ 0.22
CDHR4-201ENST00000343366 TMEFF2Q9UIK5 374 aaPredicted RBP16.45■□□□□ 0.22
CDHR4-201ENST00000343366 RIIAD1A6NNX1 92 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 SOCS2O14508 198 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 DHHO43323 396 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 IGHV3-9P01782 118 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 QDPRP09417 244 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 ZNF3P17036 446 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 NPRL3Q12980 569 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 ANKRD16Q6P6B7 361 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 BHLHA15Q7RTS1 189 aaPredicted RBP16.44■□□□□ 0.22
CDHR4-201ENST00000343366 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.44■□□□□ 0.22
CDHR4-201ENST00000343366 DPPA2Q7Z7J5 298 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 SYT14Q8NB59 555 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 OR8D4Q8NGM9 314 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 HSD17B8Q92506 261 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 NINJ1Q92982 152 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 MCHR2Q969V1 340 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 MUS81Q96NY9 551 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 GSX1Q9H4S2 264 aaPredicted RBP16.44■□□□□ 0.22
CDHR4-201ENST00000343366 CMC2Q9NRP2 79 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 KCNN3Q9UGI6 736 aa16.44■□□□□ 0.22
CDHR4-201ENST00000343366 RRP15Q9Y3B9 282 aaKnown RBP16.44■□□□□ 0.22
CDHR4-201ENST00000343366 SLC22A23A1A5C7 686 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 ITGA5P08648 1049 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 HIST1H1CP16403 213 aaKnown RBP16.43■□□□□ 0.22
CDHR4-201ENST00000343366 NPR2P20594 1047 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 PAICSP22234 425 aaKnown RBP16.43■□□□□ 0.22
CDHR4-201ENST00000343366 EDNRAP25101 427 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 CENPAP49450 140 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 FAM27E3Q08E93 113 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 GINS1Q14691 196 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 PTGES3Q15185 160 aaKnown RBP16.43■□□□□ 0.22
CDHR4-201ENST00000343366 CEACAM16Q2WEN9 425 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 TIMM23BQ5SRD1 257 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 LRFN4Q6PJG9 635 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 RASD2Q96D21 266 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 PLEKHA8Q96JA3 519 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 WACQ9BTA9 647 aa16.43■□□□□ 0.22
CDHR4-201ENST00000343366 FN1P02751 2386 aaKnown RBP16.43■□□□□ 0.22
CDHR4-201ENST00000343366 TUBAL3A6NHL2 446 aa16.42■□□□□ 0.22
CDHR4-201ENST00000343366 GOSR1O95249 250 aa16.42■□□□□ 0.22
CDHR4-201ENST00000343366 FARS2O95363 451 aaKnown RBP16.42■□□□□ 0.22
CDHR4-201ENST00000343366 RUNX1T1Q06455 604 aa16.42■□□□□ 0.22
CDHR4-201ENST00000343366 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDHR4-201ENST00000343366 OGFRL1Q5TC84 451 aaPredicted RBP16.42■□□□□ 0.22
CDHR4-201ENST00000343366 LEG1Q6P5S2 330 aa16.42■□□□□ 0.22
CDHR4-201ENST00000343366 KLHL24Q6TFL4 600 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms