RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 KCNE4Q8WWG9 221 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 AMBRA1Q9C0C7 1298 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 UBQLN3Q9H347 655 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 RPS10P5Q9NQ39 176 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 HEYLQ9NQ87 328 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-202ENST00000342494 LUZP4Q9P127 313 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 EDIL3O43854 480 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 QDPRP09417 244 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 NID1P14543 1247 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 Q6ZS52 159 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF767PQ75MW2 155 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 PRICKLE3O43900 615 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-202ENST00000342494 UBBP0CG47 229 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 RPA2P15927 270 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 EVI2BP34910 448 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF133P52736 654 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-202ENST00000342494 BTG2P78543 158 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 CLN3Q13286 438 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 GLIPR1L1Q6UWM5 242 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 LIN37Q96GY3 246 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-202ENST00000342494 TMEM43Q9BTV4 400 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 OR6C65A6NJZ3 312 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF701M0R085 212 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-202ENST00000342494 OR2J2O76002 312 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 ZGLP1P0C6A0 271 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 ZDHHC11BP0C7U3 371 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 TBXA2RP21731 343 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 SHC1P29353 583 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 GLYATL3Q5SZD4 288 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 GFRALQ6UXV0 394 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 PAQR8Q8TEZ7 354 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 TAAR9Q96RI9 348 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 TCRBV5S1A1TA0A578 114 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 TGM6O95932 706 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 GUSBP08236 651 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 ARR3P36575 388 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 CCR2P41597 374 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 RAB13P51153 203 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 SPEM2Q0P670 501 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 PEA15Q15121 130 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 OVCH1Q7RTY7 1134 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 DEFB108BQ8NET1 73 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 OR56B4Q8NH76 319 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 SDF2Q99470 211 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 EMC7Q9NPA0 242 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 RAB27BO00194 218 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 ARHGAP33O14559 1287 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 HS3ST1O14792 307 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 CXCL13O43927 109 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 RFC3P40938 356 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 ARHGAP11BQ3KRB8 267 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 GPR55Q9Y2T6 319 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-202ENST00000342494 BOLA2-SMG1P6H3BVE0 249 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 GFYI3L273 518 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 FBXO24O75426 580 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 CCL7P80098 99 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 HNF4GQ14541 408 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 DOK3Q7L591 496 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 CHST8Q9H2A9 424 aa13.75□□□□□ -0.21
UBE3B-202ENST00000342494 PHF1O43189 567 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 ZIC2O95409 532 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 NAGAP17050 411 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 PRKACAP17612 351 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 GPX2P18283 190 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 CLDN15P56746 228 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 BEX5Q5H9J7 111 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 CYP4V2Q6ZWL3 525 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF546Q86UE3 836 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 C1orf87Q8N0U7 546 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 CA13Q8N1Q1 262 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 TOPAZ1Q8N9V7 1692 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 LINC01599Q8WXQ3 324 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 DIMT1Q9UNQ2 313 aaKnown RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 NTNG1Q9Y2I2 539 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 CLDN24A6NM45 220 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 SFXN4Q6P4A7 337 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 OGFOD3Q6PK18 319 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 NOXA1Q86UR1 476 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 DNAJC5GQ8N7S2 189 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 PLPP7Q8NBV4 271 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 KCNJ15Q99712 375 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 PRELID1Q9Y255 219 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 MYH9P35579 1960 aaKnown RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 MAP1BP46821 2468 aaKnown RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 C1orf196B1AJZ1 125 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 STMND1H3BQB6 276 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 POLR2IP36954 125 aaKnown RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 HYAL1Q12794 435 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 NHSL2Q5HYW2 709 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 CAMKMTQ7Z624 323 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 RAB22AQ9UL26 194 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 POLDIP2Q9Y2S7 368 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 PGFP49763 221 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 MRPS34P82930 218 aaKnown RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 HABP2Q14520 560 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-202ENST00000342494 ADGRE4PQ86SQ3 457 aa13.74□□□□□ -0.21
UBE3B-202ENST00000342494 ANGPTL5Q86XS5 388 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms