RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 GHITMQ9H3K2 345 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 PARD6AQ9NPB6 346 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 IKZF2Q9UKS7 526 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 MYO15AQ9UKN7 3530 aa13.53□□□□□ -0.24
TPM3-208ENST00000341485 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 MT-CO3P00414 261 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 MT-ND4P03905 459 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 ADRA2CP18825 462 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 SOX2P48431 317 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 CCR6P51684 374 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 PNLIPRP2P54317 469 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 RNF4P78317 190 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 TMEM205Q6UW68 189 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 FAM198BQ6UWH4 519 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 STAC2Q6ZMT1 411 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 NFAM1Q8NET5 270 aaPredicted RBP13.52□□□□□ -0.24
TPM3-208ENST00000341485 C8orf44Q96CB5 159 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 SLC25A36Q96CQ1 311 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 TAAR9Q96RI9 348 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 INTS14Q96SY0 518 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 ZPBPQ9BS86 351 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 TRAF4Q9BUZ4 470 aaPredicted RBP13.52□□□□□ -0.24
TPM3-208ENST00000341485 CACNG6Q9BXT2 260 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 LIN7BQ9HAP6 207 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 ING1Q9UK53 422 aaPredicted RBP13.52□□□□□ -0.24
TPM3-208ENST00000341485 PTRH2Q9Y3E5 179 aaKnown RBP13.52□□□□□ -0.24
TPM3-208ENST00000341485 VPS13AQ96RL7 3174 aa13.52□□□□□ -0.24
TPM3-208ENST00000341485 ZNF318Q5VUA4 2279 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 OR4C45A6NMZ5 311 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 SUSD5O60279 629 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 LRP3O75074 770 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 STK17BO94768 372 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 GDNFP39905 211 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 CDCP2Q5VXM1 449 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 FAM205BPQ63HN1 556 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 LINGO2Q7L985 606 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 MAMDC2Q7Z304 686 aaPredicted RBP13.52□□□□□ -0.25
TPM3-208ENST00000341485 LRRTM1Q86UE6 522 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 OR2G2Q8NGZ5 317 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 GCDHQ92947 438 aaPredicted RBP13.52□□□□□ -0.25
TPM3-208ENST00000341485 LIN37Q96GY3 246 aaPredicted RBP13.52□□□□□ -0.25
TPM3-208ENST00000341485 AMELYQ99218 206 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 MNTQ99583 582 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 PRRX2Q99811 253 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 C7orf50Q9BRJ6 194 aaKnown RBP13.52□□□□□ -0.25
TPM3-208ENST00000341485 SEMA4CQ9C0C4 833 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 MED28Q9H204 178 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 OR5V1Q9UGF6 321 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 PCDHGA1Q9Y5H4 931 aa13.52□□□□□ -0.25
TPM3-208ENST00000341485 ALPK2Q86TB3 2170 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 CPAMD8Q8IZJ3 1885 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 TMED7-TICAM2A0A0A6YYA0 188 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 TRBV11-1A0A0K0K1C0 115 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 FADS1O60427 444 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 SLC25A12O75746 678 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 PLGP00747 810 aaPredicted RBP13.51□□□□□ -0.25
TPM3-208ENST00000341485 SDHBP21912 280 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 POLR2HP52434 150 aaKnown RBP13.51□□□□□ -0.25
TPM3-208ENST00000341485 EGR3Q06889 387 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 DYRK1AQ13627 763 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 CBFBQ13951 182 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 OTPQ5XKR4 325 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 DHRS13Q6UX07 377 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 ADGRG3Q86Y34 549 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 PLCZ1Q86YW0 608 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 SERPINA12Q8IW75 414 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 APCDD1LQ8NCL9 501 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 OR10AC1Q8NH08 325 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 THEM6Q8WUY1 208 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 WDR77Q9BQA1 342 aaPredicted RBP13.51□□□□□ -0.25
TPM3-208ENST00000341485 PLEKHA1Q9HB21 404 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 TCF7L1Q9HCS4 588 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 FAM86C1Q9NVL1 165 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 SLCO1C1Q9NYB5 712 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 KCNG2Q9UJ96 466 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 TMED7Q9Y3B3 224 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 GPR179Q6PRD1 2367 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 WDFY4Q6ZS81 3184 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 TRBV5-7A0A0A0MS05 114 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 ADAM10O14672 748 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 NPIPB7O75200 414 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 MAPK3P27361 379 aaPredicted RBP13.51□□□□□ -0.25
TPM3-208ENST00000341485 P2RX1P51575 399 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 TRIP6Q15654 476 aaKnown RBP13.51□□□□□ -0.25
TPM3-208ENST00000341485 ACKR1Q16570 336 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 SGCBQ16585 318 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 FAM69BQ5VUD6 431 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 LAMTOR1Q6IAA8 161 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 PRSS35Q8N3Z0 413 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 ZNF519Q8TB69 540 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 GPR119Q8TDV5 335 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 NSMAFQ92636 917 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 FOXN4Q96NZ1 517 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 MRPL15Q9P015 296 aaKnown RBP13.51□□□□□ -0.25
TPM3-208ENST00000341485 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 RABL2AQ9UBK7 228 aaPredicted RBP13.51□□□□□ -0.25
TPM3-208ENST00000341485 RABL2BQ9UNT1 228 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 FOXJ3Q9UPW0 622 aa13.51□□□□□ -0.25
TPM3-208ENST00000341485 KIF26BQ2KJY2 2108 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms