RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SHISA6Q6ZSJ9 500 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 KRT77Q7Z794 578 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 FAM71CQ8NEG0 241 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 INTS14Q96SY0 518 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 PPA2Q9H2U2 334 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 POFUT1Q9H488 388 aa13.06□□□□□ -0.32
CPSF7-201ENST00000340437 ITGA5P08648 1049 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 AKT2P31751 481 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 GMFBP60983 142 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF74Q16587 644 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 MESTQ5EB52 335 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 WDR38Q5JTN6 314 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 OR2AK2Q8NG84 335 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 TAAR8Q969N4 342 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 TSPAN32Q96QS1 320 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 TINAGL1Q9GZM7 467 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-201ENST00000340437 NXF5Q9H1B4 397 aaKnown RBP13.05□□□□□ -0.32
CPSF7-201ENST00000340437 CENPMQ9NSP4 180 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 STEAP1Q9UHE8 339 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 SLC25A12O75746 678 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 MPZL1O95297 269 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 NMBP08949 121 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 STARP49675 285 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 TAGLNQ01995 201 aaKnown RBP13.05□□□□□ -0.32
CPSF7-201ENST00000340437 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 OR4S1Q8NGB4 309 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-201ENST00000340437 FAM3DQ96BQ1 224 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 TGM7Q96PF1 710 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 DMRTA2Q96SC8 542 aa13.05□□□□□ -0.32
CPSF7-201ENST00000340437 NOP16Q9Y3C1 178 aaKnown RBP13.05□□□□□ -0.32
CPSF7-201ENST00000340437 GGT3PA6NGU5 568 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 WISP1O95388 367 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 SHHQ15465 462 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 GLYATL3Q5SZD4 288 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 SDR16C5Q8N3Y7 309 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 PRSS35Q8N3Z0 413 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 ACBD4Q8NC06 268 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 KLHL15Q96M94 604 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 ZCCHC4Q9H5U6 513 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 OPN4Q9UHM6 478 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 SDHAP31040 664 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 PSMD4P55036 377 aaKnown RBP13.04□□□□□ -0.32
CPSF7-201ENST00000340437 SKP1P63208 163 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 GK2Q14410 553 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-201ENST00000340437 RAB11BQ15907 218 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 NHLRC3Q5JS37 347 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 SLC6A19Q695T7 634 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 WBP2NLQ6ICG8 309 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 ADGRG3Q86Y34 549 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 THAP3Q8WTV1 239 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-201ENST00000340437 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-201ENST00000340437 MMP25Q9NPA2 562 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 SLCO1B1Q9Y6L6 691 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 TRANK1O15050 2925 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 EFCAB7A8K855 629 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 ARPC3O15145 178 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 CTAG2O75638 210 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 RAB3DO95716 219 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 RLN2P04090 185 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 ADAM8P78325 824 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 SLC35D3Q5M8T2 416 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 STEAP1BQ6NZ63 245 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 TTLL10Q6ZVT0 673 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 KCTD9Q7L273 389 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 LRRTM1Q86UE6 522 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 LINC00346Q8IVM7 164 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 GPR160Q9UJ42 338 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 KCNMB2Q9Y691 235 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 FREM3P0C091 2139 aa13.04□□□□□ -0.32
CPSF7-201ENST00000340437 OR4C45A6NMZ5 311 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 OPN1LWP04000 364 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 AKAIN1P0CW23 69 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 CALCBP10092 127 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 GGTLC2Q14390 218 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 PDZD9Q8IXQ8 264 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 BEST3Q8N1M1 668 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF417Q8TAU3 575 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 TSLPQ969D9 159 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 RADILQ96JH8 1075 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 OR11A1Q9GZK7 315 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 RWDD3Q9Y3V2 267 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 TMEM184BQ9Y519 407 aaPredicted RBP13.03□□□□□ -0.32
CPSF7-201ENST00000340437 PPP3CBP16298 524 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 ZP2Q05996 745 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 LINC00114Q6XXX2 140 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF546Q86UE3 836 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 FAM219AQ8IW50 185 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF471Q9BX82 626 aaPredicted RBP13.03□□□□□ -0.32
CPSF7-201ENST00000340437 RTN4RQ9BZR6 473 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 TAS2R4Q9NYW5 299 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 B9D1Q9UPM9 204 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 DHDHQ9UQ10 334 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 NPTNQ9Y639 398 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 PRRC2CQ9Y520 2896 aaKnown RBP13.03□□□□□ -0.32
CPSF7-201ENST00000340437 A6NCN8 305 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 H7C417 338 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 XRCC3O43542 346 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 ALOX12BO75342 701 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms