RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 EMC3Q9P0I2 261 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF391Q9UJN7 358 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 IER3IP1Q9Y5U9 82 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CIB4A0PJX0 185 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 GJE1A6NN92 205 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 C12orf71A8MTZ7 269 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 DCTN6O00399 190 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ITGA10O75578 1167 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SEC24DO94855 1032 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 NR2C1P13056 603 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 GABRA1P14867 456 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 NANOS3P60323 173 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 FAM199XQ6PEV8 388 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 UNQ6494/PRO21346Q6UXR6 183 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PLEKHG7Q6ZR37 379 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 TMPPEQ6ZT21 453 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 UTS2BQ765I0 119 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 LINGO2Q7L985 606 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 LRRC28Q86X40 367 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR10G3Q8NGC4 313 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 METTL21AQ8WXB1 218 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 AP3S1Q92572 193 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 DCBLD2Q96PD2 775 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 FSCN3Q9NQT6 498 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 FRRS1LQ9P0K9 344 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 RPS6KB2Q9UBS0 482 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 GRIP1Q9Y3R0 1128 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 DMDP11532 3685 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR6C6A6NF89 314 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 C9J4A7 227 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 H3BN98 237 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 MYL12BO14950 172 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR2J2O76002 312 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 WNT2P09544 360 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 MYF5P13349 255 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OPRM1P35372 400 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SEPHS1P49903 392 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 RAC3P60763 192 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 MFAP5Q13361 173 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ALKBH1Q13686 389 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ACKR1Q16570 336 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SRSF7Q16629 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ELFN2Q5R3F8 820 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 CREB3L2Q70SY1 520 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SLC16A14Q7RTX9 510 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ATP6V1C2Q8NEY4 427 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR52N5Q8NH56 324 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ZHX1-C8orf76Q96EF9 292 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR10A4Q9H209 315 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SSR3Q9UNL2 185 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF281Q9Y2X9 895 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 CMAHPQ9Y471 501 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR10H1Q9Y4A9 318 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 R4GMQ9 66 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SPTA1P02549 2419 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PCNX3Q9H6A9 2034 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR2W5A6NFC9 320 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 E9PI62 339 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 AIPO00170 330 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 AKR7A3O95154 331 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 KLK3P07288 261 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ACHEP22303 614 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 GRPRP30550 384 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 BTCP35070 178 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 GNALP38405 381 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 AQP2P41181 271 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ARL4DP49703 201 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 CLDN18P56856 261 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SRSF4Q08170 494 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 DNASE1L3Q13609 305 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 DESI1Q6ICB0 168 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 RAB43Q86YS6 212 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 TMEM156Q8N614 296 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PHOSPHO1Q8TCT1 267 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SLC25A44Q96H78 314 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ERMAPQ96PL5 475 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 IFT27Q9BW83 186 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 RBCK1Q9BYM8 510 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR8D2Q9GZM6 311 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OCEL1Q9H607 264 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 LIN28AQ9H9Z2 209 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SNTG1Q9NSN8 517 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF224Q9NZL3 707 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 SPATA2Q9UM82 520 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF175Q9Y473 711 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 DCHS1Q96JQ0 3298 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PNMA8CA0A1B0GUJ8 204 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 OR6C65A6NJZ3 312 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 NOTOA8MTQ0 251 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PTGES3LE9PB15 166 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 NOL3O60936 208 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 CH25HO95992 272 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ACTL6AO96019 429 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ACAA1P09110 424 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 CST2P09228 141 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PGDP52209 483 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 MRPS10P82664 201 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 MRPS34P82930 218 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 HSF1Q00613 529 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 MYBPHQ13203 477 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms