RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ZNF362Q5T0B9 420 aaPredicted RBP12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 C10orf128Q5T292 105 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 C12orf73Q69YU5 71 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 STEAP2Q8NFT2 490 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 OR1K1Q8NGR3 316 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 NRG4Q8WWG1 115 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 PLEKHA8Q96JA3 519 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 SLC38A2Q96QD8 506 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 DDOQ99489 341 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 ACTR6Q9GZN1 396 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 NUAK2Q9H093 628 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 FN3KQ9H479 309 aa12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 SRA1Q9HD15 236 aaKnown RBP12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 RPRD1BQ9NQG5 326 aaKnown RBP12.37□□□□□ -0.43
APOBEC3B-202ENST00000335760 CACNA1CQ13936 2221 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 A0A096LPE4 126 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 A0A1W2PPZ6 126 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 KHDRBS3O75525 346 aaKnown RBP12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 SEC14L2O76054 403 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 CTLA4P16410 223 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 SORDQ00796 357 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 DBPQ10586 325 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 ETFDHQ16134 617 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 SNAPC1Q16533 368 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 OR7E24Q6IFN5 339 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 ANKRD16Q6P6B7 361 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 DNM1P34Q6PK57 102 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 ZNF813Q6ZN06 617 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 C1orf162Q8NEQ5 155 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 OTULINQ96BN8 352 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 MUS81Q96NY9 551 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 TSSK2Q96PF2 358 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 FOXB1Q99853 325 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 PRRG3Q9BZD7 231 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 GRIP2Q9C0E4 1043 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 VCXQ9H320 206 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 SMPD3Q9NY59 655 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 B9D1Q9UPM9 204 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 UGT2A1Q9Y4X1 527 aa12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
APOBEC3B-202ENST00000335760 A0A1W2PPL8 197 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 FAM183AA6NL82 134 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 DLGAP1O14490 977 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 B4GALT1P15291 398 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 CRABP1P29762 137 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 CDAP32320 146 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 HIKESHIQ53FT3 197 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 KLHL24Q6TFL4 600 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 OR6V1Q8N148 313 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 HTRA1Q92743 480 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 BCL2L2Q92843 193 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 RDH12Q96NR8 316 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 FOXN4Q96NZ1 517 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 OR10A4Q9H209 315 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 MED20Q9H944 212 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 SEC61A2Q9H9S3 476 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 TMEM38BQ9NVV0 291 aa12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 COA3Q9Y2R0 106 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 FASNP49327 2511 aaKnown RBP12.35□□□□□ -0.43
APOBEC3B-202ENST00000335760 IGLV1-36A0A0B4J1U3 117 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 OR5H1A6NKK0 313 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 FAM171A2A8MVW0 826 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 PRR23D1E9PI22 279 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 M0R129 80 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 DCTN6O00399 190 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 PRR23D2P0DMB1 279 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 PPP3CBP16298 524 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 PAICSP22234 425 aaKnown RBP12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 CENPAP49450 140 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 SLC25A1P53007 311 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 SGCAQ16586 387 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 TBRG1Q3YBR2 411 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 FBXW10Q5XX13 1052 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 PLBD1Q6P4A8 553 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 C17orf78Q8N4C9 275 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 ZNF555Q8NEP9 628 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 OR9Q1Q8NGQ5 310 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 OR2T4Q8NH00 348 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 LINC01560Q8TB33 94 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 HRASLS5Q96KN8 279 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 SLC17A5Q9NRA2 495 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 FAM118AQ9NWS6 357 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 NDRG3Q9UGV2 375 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 FKBP7Q9Y680 259 aa12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 HELZ2Q9BYK8 2649 aaKnown RBP12.34□□□□□ -0.43
APOBEC3B-202ENST00000335760 DOPEY1Q5JWR5 2465 aa12.33□□□□□ -0.43
APOBEC3B-202ENST00000335760 LOC100130705A0A1B0GUX0 176 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 A0A1W2PR80 420 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 SH3D21A4FU49 640 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 TUBAL3A6NHL2 446 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 E9PQ18 207 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 TLX2O43763 284 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 PRKYO43930 277 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 FARS2O95363 451 aaKnown RBP12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 GYPBP06028 91 aa12.33□□□□□ -0.44
APOBEC3B-202ENST00000335760 CLUP10909 449 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms