RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 C11orf88Q6PI97 169 aa12.62□□□□□ -0.39
SF1-202ENST00000334944 ARHGEF39Q8N4T4 335 aa12.62□□□□□ -0.39
SF1-202ENST00000334944 BCORP1Q8N888 145 aa12.62□□□□□ -0.39
SF1-202ENST00000334944 ZNF671Q8TAW3 534 aa12.62□□□□□ -0.39
SF1-202ENST00000334944 GHSRQ92847 366 aa12.62□□□□□ -0.39
SF1-202ENST00000334944 NDC1Q9BTX1 674 aa12.62□□□□□ -0.39
SF1-202ENST00000334944 ISYNA1Q9NPH2 558 aa12.62□□□□□ -0.39
SF1-202ENST00000334944 OR2T1O43869 369 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 CREBL2O60519 120 aaPredicted RBP12.61□□□□□ -0.39
SF1-202ENST00000334944 MTNR1BP49286 362 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 ZNF251Q9BRH9 671 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 PAPOLGQ9BWT3 736 aaKnown RBP12.61□□□□□ -0.39
SF1-202ENST00000334944 OR8D2Q9GZM6 311 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 OR10A5Q9H207 317 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 ASB6Q9NWX5 421 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 ARID1AO14497 2285 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 MEX3AA1L020 520 aaKnown RBP12.61□□□□□ -0.39
SF1-202ENST00000334944 SLC22A31A6NKX4 558 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 UBL3O95164 117 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 AKR1C3P42330 323 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 PDZK1IP1Q13113 114 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 CD226Q15762 336 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 PRTGQ2VWP7 1150 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 LRRC37A5PQ49AS3 106 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 ACER2Q5QJU3 275 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 TTLL10Q6ZVT0 673 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 TSTD1Q8NFU3 115 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 OR1S2Q8NGQ3 325 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 GAL3ST4Q96RP7 486 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 PDCD1LG2Q9BQ51 273 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 PDCD10Q9BUL8 212 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 JAM3Q9BX67 310 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 Q9N2J8 555 aa12.61□□□□□ -0.39
SF1-202ENST00000334944 OR6C65A6NJZ3 312 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 HTR3BO95264 441 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 MT-ND5P03915 603 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 H2AFB1P0C5Y9 115 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 MMP15P51511 669 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 LUMP51884 338 aaPredicted RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 RBM39Q14498 530 aaKnown RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 TMEM44Q2T9K0 475 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 B3GNTL1Q67FW5 361 aaPredicted RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 GLDNQ6ZMI3 551 aaPredicted RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 ABHD4Q8TB40 342 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 TSLPQ969D9 159 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 TMEM185BQ9H7F4 350 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 TMEM138Q9NPI0 162 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 OPN4Q9UHM6 478 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 OR6C76A6NM76 312 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 H7C1C5 153 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 CTNSO60931 367 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 CSF2RBP32927 897 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 RPS27P42677 84 aaKnown RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 GPR3P46089 330 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 LCN6P62502 163 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 C21orf62-AS1Q17RA5 79 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 SLC22A10Q63ZE4 541 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 MED25Q71SY5 747 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 EIF4E3Q8N5X7 224 aaKnown RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 LGALS14Q8TCE9 139 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 DERL3Q96Q80 235 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 ZNF230Q9UIE0 474 aaPredicted RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 A0A1W2PPE3 182 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 C17orf105B2RV13 164 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 CLDN4O14493 209 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 KCNAB3O43448 404 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 VSIG10L2P0DP72 767 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 SLC2A5P22732 501 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 BLOC1S1P78537 153 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 DHODHQ02127 395 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 SHISA6Q6ZSJ9 500 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 TMEM17Q86X19 198 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 THEM6Q8WUY1 208 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 TLNRD1Q9H1K6 362 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 LMAN1LQ9HAT1 526 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 GNG8Q9UK08 70 aa12.6□□□□□ -0.39
SF1-202ENST00000334944 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
SF1-202ENST00000334944 PYCARD-AS1I3L0S3 204 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 WISP1O95388 367 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 AK1P00568 194 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 F13BP05160 661 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 SLC6A6P31641 620 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 EPHA4P54764 986 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 TGIF1Q15583 401 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 ACSM3Q53FZ2 586 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 ULK3Q6PHR2 472 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 LMF2Q9BU23 707 aaKnown RBP12.59□□□□□ -0.39
SF1-202ENST00000334944 TRIM2Q9C040 744 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 A0A1B0GUH1 482 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 A0A1B0GV90 55 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 FAM221BA6H8Z2 402 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 IFNGR1P15260 489 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 HPGDP15428 266 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 CAPZBP47756 277 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 HES5Q5TA89 166 aa12.59□□□□□ -0.39
SF1-202ENST00000334944 H3F3CQ6NXT2 135 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms