RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SPOCK3Q9BQ16 436 aa14.07□□□□□ -0.16
LRRC28-202ENST00000331450 USB1Q9BQ65 265 aaKnown RBP14.07□□□□□ -0.16
LRRC28-202ENST00000331450 CMC2Q9NRP2 79 aa14.07□□□□□ -0.16
LRRC28-202ENST00000331450 TMEM38BQ9NVV0 291 aa14.07□□□□□ -0.16
LRRC28-202ENST00000331450 PLEKHB1Q9UF11 243 aaPredicted RBP14.07□□□□□ -0.16
LRRC28-202ENST00000331450 RRP15Q9Y3B9 282 aaKnown RBP14.07□□□□□ -0.16
LRRC28-202ENST00000331450 USP9YO00507 2555 aaPredicted RBP14.07□□□□□ -0.16
LRRC28-202ENST00000331450 ICE1Q9Y2F5 2266 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 CIB4A0PJX0 185 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 OR6C68A6NDL8 312 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 DCTN6O00399 190 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 SEC14L2O76054 403 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 THBDP07204 575 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 POLR2IP36954 125 aaKnown RBP14.06□□□□□ -0.16
LRRC28-202ENST00000331450 RAD23AP54725 363 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 NPRL3Q12980 569 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 CRMP1Q14194 572 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 TBRG1Q3YBR2 411 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 NRN1LQ496H8 165 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 TIMM23BQ5SRD1 257 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 OGFRL1Q5TC84 451 aaPredicted RBP14.06□□□□□ -0.16
LRRC28-202ENST00000331450 SLX4IPQ5VYV7 408 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 LPCAT4Q643R3 524 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 LEG1Q6P5S2 330 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 MEX3BQ6ZN04 569 aaKnown RBP14.06□□□□□ -0.16
LRRC28-202ENST00000331450 P2RY8Q86VZ1 359 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 JAZF1Q86VZ6 243 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 SLC37A3Q8NCC5 494 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 WFIKKN1Q96NZ8 548 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 SLC17A5Q9NRA2 495 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 KLHL21Q9UJP4 597 aa14.06□□□□□ -0.16
LRRC28-202ENST00000331450 ARPC4-TTLL3A0A0A6YYG9 625 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 IGLV1-36A0A0B4J1U3 117 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 SH3D21A4FU49 640 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 TUBAL3A6NHL2 446 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 SURF4O15260 269 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 RENP00797 406 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 B4GALT1P15291 398 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 CDH2P19022 906 aaPredicted RBP14.05□□□□□ -0.16
LRRC28-202ENST00000331450 ZNF84P51523 738 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 MRPS34P82930 218 aaKnown RBP14.05□□□□□ -0.16
LRRC28-202ENST00000331450 SLC34A1Q06495 639 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 TAB1Q15750 504 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 ETFDHQ16134 617 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 HIKESHIQ53FT3 197 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 C1QTNF12Q5T7M4 302 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 C12orf73Q69YU5 71 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 ZBTB46Q86UZ6 589 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 PACRGLQ8N7B6 248 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 WDR31Q8NA23 367 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 LINC01560Q8TB33 94 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 NABP1Q96AH0 204 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 MBOAT4Q96T53 435 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 NMNAT2Q9BZQ4 307 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 NUAK2Q9H093 628 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 FN3KQ9H479 309 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 C8orf4Q9NR00 106 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 CRIM1Q9NZV1 1036 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 NDRG3Q9UGV2 375 aa14.05□□□□□ -0.16
LRRC28-202ENST00000331450 RIIAD1A6NNX1 92 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 DLGAP1O14490 977 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 SLC16A7O60669 478 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 IFNGP01579 166 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 HMGN1P05114 100 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 HOXB1P14653 301 aaPredicted RBP14.04□□□□□ -0.16
LRRC28-202ENST00000331450 ZNF3P17036 446 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 DBPQ10586 325 aaPredicted RBP14.04□□□□□ -0.16
LRRC28-202ENST00000331450 LRRC36Q1X8D7 754 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 SP5Q6BEB4 398 aaPredicted RBP14.04□□□□□ -0.16
LRRC28-202ENST00000331450 KLHL24Q6TFL4 600 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 ZNF813Q6ZN06 617 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 OR6V1Q8N148 313 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 SLC22A24Q8N4F4 322 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 CYB561A3Q8NBI2 242 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 NSMAFQ92636 917 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 RDH12Q96NR8 316 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 DACH2Q96NX9 599 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 TSSK2Q96PF2 358 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 MED18Q9BUE0 208 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 GRIP2Q9C0E4 1043 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 RACGAP1Q9H0H5 632 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 RIBC2Q9H4K1 309 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 OBP2BQ9NPH6 170 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 RPRD1BQ9NQG5 326 aaKnown RBP14.04□□□□□ -0.16
LRRC28-202ENST00000331450 ZNF224Q9NZL3 707 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 AMDHD2Q9Y303 409 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 ORC6Q9Y5N6 252 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 SLC25A15Q9Y619 301 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 FKBP7Q9Y680 259 aa14.04□□□□□ -0.16
LRRC28-202ENST00000331450 A0A096LPE4 126 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 A0A1W2PPZ6 126 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 ZNF503-AS2A6NEH8 195 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 KHDRBS3O75525 346 aaKnown RBP14.03□□□□□ -0.16
LRRC28-202ENST00000331450 SNAP29O95721 258 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 COL8A1P27658 744 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 CRABP1P29762 137 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 CDAP32320 146 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 KIR2DL3P43628 341 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 SLC25A1P53007 311 aa14.03□□□□□ -0.16
LRRC28-202ENST00000331450 EFNB1P98172 346 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms