RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 UBQLN4Q9NRR5 601 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 DNMT3BQ9UBC3 853 aaKnown RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 PCDHB10Q9UN67 800 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 UBE2KP61086 200 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SGCBQ16585 318 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 OR1M1Q8NGA1 313 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SLC2A12Q8TD20 617 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 RAB3CQ96E17 227 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 KLHDC7BQ96G42 594 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SORCS2Q96PQ0 1159 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SSX3Q99909 188 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 ALKBH4Q9NXW9 302 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 ICKQ9UPZ9 632 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 FBXO7Q9Y3I1 522 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 ATAD5Q96QE3 1844 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 GPR31O00270 319 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 OR2F2O95006 317 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 CSF2RBP32927 897 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 OR2F1Q13607 317 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 KIAA0141Q14154 515 aaPredicted RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 TMEM156Q8N614 296 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 NXPE3Q969Y0 559 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 TINAGL1Q9GZM7 467 aaPredicted RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 ZNF175Q9Y473 711 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 TRIP12Q14669 1992 aaPredicted RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 OR2W5A6NFC9 320 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 H7C1Q1 480 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 NUDT21O43809 227 aaKnown RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 FGF17O60258 216 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 CNOT4O95628 575 aaKnown RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 CALCBP10092 127 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 ACSM1Q08AH1 577 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 PMPCAQ10713 525 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 BAMBIQ13145 260 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 EXOSC6Q5RKV6 272 aaKnown RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 PGAP1Q75T13 922 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 TRILQ7L0X0 811 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 OR1J2Q8NGS2 313 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SNIP1Q8TAD8 396 aaKnown RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 RBM24Q9BX46 236 aaKnown RBP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.86□□□□□ -0.35
EPHB3-201ENST00000330394 TAS2R4Q9NYW5 299 aa12.86□□□□□ -0.35
EPHB3-201ENST00000330394 SDCBPO00560 298 aaPredicted RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 ZNF264O43296 627 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 MGMTP16455 207 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 CNR1P21554 472 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 EIF2S3LQ2VIR3 472 aaKnown RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 ASTLQ6HA08 431 aaPredicted RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 BAP18Q8IXM2 172 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 DIO2Q92813 273 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 TMEM59Q9BXS4 323 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 EVA1AQ9H8M9 152 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 TSTD3H0UI37 97 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 NME2P1O60361 137 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 DNAJB6O75190 326 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 ZFPL1O95159 310 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 SEZ6L2Q6UXD5 910 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 ADIPOR2Q86V24 386 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 LHFPL5Q8TAF8 219 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 FRZBQ92765 325 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 MIB2Q96AX9 1013 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 GIMAP5Q96F15 307 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 C6orf106Q9H6K1 298 aaPredicted RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 FAM212BQ9NTI7 297 aaPredicted RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 APOBEC3BQ9UH17 382 aaKnown RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 GMEB2Q9UKD1 530 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 FAM230AA0A1W2PPH8 454 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 LINC00862A6NCI5 91 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 PSMB6P28072 239 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 OR1D4P47884 311 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 AFF3P51826 1226 aaKnown RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 MPEG1Q2M385 716 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 ZNF793Q6ZN11 406 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 MCATQ8IVS2 390 aaKnown RBP12.85□□□□□ -0.35
EPHB3-201ENST00000330394 PPP4R1LQ9P1A2 415 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 SCML1Q9UN30 329 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 MOKQ9UQ07 419 aa12.85□□□□□ -0.35
EPHB3-201ENST00000330394 A0A0U1RQK1 487 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 PRSS38A1L453 326 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 ZNF354AO60765 605 aaPredicted RBP12.84□□□□□ -0.35
EPHB3-201ENST00000330394 GCM2O75603 506 aaPredicted RBP12.84□□□□□ -0.35
EPHB3-201ENST00000330394 CTSLP07711 333 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 ZNF44P15621 663 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 CAMK2DQ13557 499 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 HIST2H3PS2Q5TEC6 136 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 TMEM91Q6ZNR0 172 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 ANGPTL5Q86XS5 388 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 SYS1Q8N2H4 156 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 CCDC54Q8NEL0 328 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 FBLIM1Q8WUP2 373 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 ZNF75AQ96N20 296 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 SPACA1Q9HBV2 294 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 GFOD1Q9NXC2 390 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 LRIT1Q9P2V4 623 aa12.84□□□□□ -0.35
EPHB3-201ENST00000330394 DAPP1Q9UN19 280 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms