RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 RPL15P61313 204 aaKnown RBP12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 SF3A3Q12874 501 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 EPS8Q12929 822 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 SCARB2Q14108 478 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 GLIPR1L2Q4G1C9 344 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 RUNDC3AQ59EK9 446 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 COQ5Q5HYK3 327 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 RPS26P11Q5JNZ5 115 aaPredicted RBP12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 WBP2NLQ6ICG8 309 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF836Q6ZNA1 936 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 MSRB3Q8IXL7 192 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 CADM2Q8N3J6 435 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 ZIC4Q8N9L1 334 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 HIPK4Q8NE63 616 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 CCDC106Q9BWC9 280 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 OR11A1Q9GZK7 315 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 EVA1AQ9H8M9 152 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 SAR1AQ9NR31 198 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 CTPS2Q9NRF8 586 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 UBAP1Q9NZ09 502 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 RPS6KB2Q9UBS0 482 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 FZR1Q9UM11 496 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 SACSQ9NZJ4 4579 aa12.48□□□□□ -0.41
CTHRC1-201ENST00000330295 TRBV5-3A0A0A0MS03 114 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 TMED7-TICAM2A0A0A6YYA0 188 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 A0A1W2PPW3 197 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF208O43345 1280 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 EIF1BO60739 113 aaKnown RBP12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 BCAS1O75363 584 aaPredicted RBP12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 PPP1R3DO95685 299 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 IGHMP01871 453 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 FAM157BP0CG42 384 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 TACR3P29371 465 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 PRKAR1BP31321 381 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 NCALDP61601 193 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 KLF10Q13118 480 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 MAPK11Q15759 364 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 TRMT5Q32P41 509 aaKnown RBP12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 ALKBH6Q3KRA9 238 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 INTS11Q5TA45 600 aaKnown RBP12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF620Q6ZNG0 422 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 LINGO2Q7L985 606 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 CPPED1Q9BRF8 314 aaPredicted RBP12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 RLIMQ9NVW2 624 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 SELENONQ9NZV5 590 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 TMEM181Q9P2C4 612 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 DUSP13Q9UII6 198 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 TRAPPC4Q9Y296 219 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 POLR3KQ9Y2Y1 108 aaPredicted RBP12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 TMED7Q9Y3B3 224 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 NOX1Q9Y5S8 564 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 CACNG2Q9Y698 323 aa12.47□□□□□ -0.41
CTHRC1-201ENST00000330295 ISPDA4D126 451 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 C17orf100A8MU93 164 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 AP3D1O14617 1153 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 MRASO14807 208 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 CCNA2P20248 432 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 SH3BGRP55822 239 aaPredicted RBP12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 HFEQ30201 348 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 PCGF3Q3KNV8 242 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 PAQR6Q6TCH4 344 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 MDP1Q86V88 176 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 ARMC8Q8IUR7 673 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 CLIP4Q8N3C7 705 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 TMEM86BQ8N661 226 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 OR9K2Q8NGE7 335 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 SLC47A1Q96FL8 570 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 ECSITQ9BQ95 431 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 NAA11Q9BSU3 229 aaPredicted RBP12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 OSGIN1Q9UJX0 560 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 AP3M1Q9Y2T2 418 aa12.46□□□□□ -0.41
CTHRC1-201ENST00000330295 DOCK11Q5JSL3 2073 aa12.46□□□□□ -0.42
CTHRC1-201ENST00000330295 H0YL77 283 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 GKN3PP0CG01 181 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 MTPNP58546 118 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 RPS23P62266 143 aaKnown RBP12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 SLC35A1P78382 337 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 NKPD1Q17RQ9 610 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 TMEM154Q6P9G4 183 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 DHRS4L2Q6PKH6 230 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 USP51Q70EK9 711 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 CPLX4Q7Z7G2 160 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 PATL1Q86TB9 770 aaKnown RBP12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 SERPINA11Q86U17 422 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 SNX32Q86XE0 403 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 OR8J3Q8NGG0 315 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 SLC26A7Q8TE54 656 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 PHF21AQ96BD5 680 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 TAPBPLQ9BX59 468 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 NKIRAS2Q9NYR9 191 aa12.45□□□□□ -0.42
CTHRC1-201ENST00000330295 DNAH1Q9P2D7 4330 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 TRAV40A0A0B4J280 105 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 A8MVM7 634 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 C3orf84H3BNL1 204 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 GPIP06744 558 aa12.44□□□□□ -0.42
CTHRC1-201ENST00000330295 AQP1P29972 269 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms