RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ZNF133P52736 654 aaPredicted RBP23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 EFNB3Q15768 340 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 C10orf128Q5T292 105 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 FAM205BPQ63HN1 556 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 PODNL1Q6PEZ8 512 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 DNM1P46Q6ZS02 220 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 LRRC75AQ8NAA5 344 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 OR4K5Q8NGD3 323 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 OR13C2Q8NGS9 318 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 HDAC2Q92769 488 aaKnown RBP23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 SH3GL3Q99963 347 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 ALG12Q9BV10 488 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 ZNF346Q9UL40 294 aaKnown RBP23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 SPEF1Q9Y4P9 236 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 HEXAP06865 529 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 THBS4P35443 961 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 GPR4P46093 362 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 DSCR9P59020 149 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 VLDLRP98155 873 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 CD47Q08722 323 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 FHL1Q13642 323 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 DAG1Q14118 895 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 SLC36A2Q495M3 483 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 FGD3Q5JSP0 725 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 FNDC8Q8TC99 324 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 KCNK17Q96T54 332 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 NDEL1Q9GZM8 345 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 FBXO9Q9UK97 447 aaPredicted RBP23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 V9GYQ6 96 aa23.91■■□□□ 1.42
ATPAF1-201ENST00000329231 A6NIZ1 184 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 CDC42EP2O14613 210 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 UBOX5O94941 541 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 LY6G6DO95868 133 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 PATE4P0C8F1 98 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 ZNF35P13682 527 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 NPR2P20594 1047 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 NR4A1P22736 598 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 EFNA4P52798 201 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 RAP1BP61224 184 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 RAP1AP62834 184 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 SNTB2Q13425 540 aaKnown RBP23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 RAB39AQ14964 217 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 ZBED5Q49AG3 693 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 TMEM53Q6P2H8 277 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 SLC16A14Q7RTX9 510 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 IGFN1Q86VF2 1251 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 FGFBP3Q8TAT2 258 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 HTRA1Q92743 480 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 MCUR1Q96AQ8 359 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 RBP7Q96R05 134 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 RHNO1Q9BSD3 238 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 REG4Q9BYZ8 158 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 RNF121Q9H920 327 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 KRCC1Q9NPI7 259 aaPredicted RBP23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 TAS2R1Q9NYW7 299 aa23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 PRPF19Q9UMS4 504 aaKnown RBP23.9■■□□□ 1.42
ATPAF1-201ENST00000329231 RNF223E7ERA6 249 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 SLC2A10O95528 541 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 SERPINA5P05154 406 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 RPL4P36578 427 aaKnown RBP23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 SMIM11AP58511 58 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 THEM4Q5T1C6 240 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 KRT80Q6KB66 452 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 CLEC2AQ6UVW9 174 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 Q71RC1 249 aaPredicted RBP23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 NMD3Q96D46 503 aaKnown RBP23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 DHRS1Q96LJ7 313 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 PLK3Q9H4B4 646 aa23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 SETD2Q9BYW2 2564 aaPredicted RBP23.89■■□□□ 1.41
ATPAF1-201ENST00000329231 DIRAS1O95057 198 aa23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 SEMG1P04279 462 aa23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 MRPS34P82930 218 aaKnown RBP23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 GALK2Q01415 458 aa23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 ZNF519Q8TB69 540 aa23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 FAM46AQ96IP4 442 aaKnown RBP23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 TSPAN32Q96QS1 320 aa23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 KCNN2Q9H2S1 579 aa23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 SIAEQ9HAT2 523 aa23.88■■□□□ 1.41
ATPAF1-201ENST00000329231 F12P00748 615 aaPredicted RBP23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 FMODQ06828 376 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 IQCCQ4KMZ1 466 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 OR52J3Q8NH60 311 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 NSMAFQ92636 917 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 MUC13Q9H3R2 512 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 C1orf198Q9H425 327 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 ACTR3BQ9P1U1 418 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 GRHPRQ9UBQ7 328 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 CMAHPQ9Y471 501 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 FKBP7Q9Y680 259 aa23.87■■□□□ 1.41
ATPAF1-201ENST00000329231 TRBV4-1A0A0J9YWV2 114 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 PTHP01270 115 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 CD14P08571 375 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 ERVK-25P63136 954 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 SLC25A47Q6Q0C1 308 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 ZNF584Q8IVC4 421 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 LRRC18Q8N456 261 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 ARIH2OSQ8N7S6 290 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 OR10H5Q8NGA6 315 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 AURKCQ9UQB9 309 aa23.86■■□□□ 1.41
ATPAF1-201ENST00000329231 UGT2A1Q9Y4X1 527 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms