RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 IGKV1D-43A0A0B4J1Z2 117 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MBD3L4A6NDZ8 208 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MBD3L3A6NE82 208 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MBD3L5A6NJ08 208 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 OR6C65A6NJZ3 312 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 FAM171A2A8MVW0 826 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 J3QRE1 110 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MRPL33O75394 65 aaKnown RBP9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 FADS2O95864 444 aaKnown RBP9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 STSP08842 583 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 GLO1Q04760 184 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 RBPJQ06330 500 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 GUSBP1Q15486 140 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 C10orf128Q5T292 105 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 RPTNQ6XPR3 784 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 C9orf106Q8NAJ2 232 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 OR4F15Q8NGB8 312 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 OR51G2Q8NGK0 314 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MBD3L2Q8NHZ7 208 aaPredicted RBP9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MCHR2Q969V1 340 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 JAM3Q9BX67 310 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MARCH7Q9H992 704 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 B3GAT2Q9NPZ5 323 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 SCOCQ9UIL1 159 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 PCDHGB1Q9Y5G3 927 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 FAM215AQ9Y5M1 114 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 SNX5Q9Y5X3 404 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 ARHGAP21Q5T5U3 1957 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 DOCK7Q96N67 2140 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 PRRG2O14669 202 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 APOL3O95236 402 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 IGHA1P01876 353 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 QDPRP09417 244 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 SBK2P0C263 348 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 GAAP10253 952 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 DCKP27707 260 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 PHYHD1Q5SRE7 291 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 RIPPLY2Q5TAB7 128 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 RTL6Q6ICC9 239 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 LRFN4Q6PJG9 635 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 SHFQ7M4L6 423 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 SPARTQ8N0X7 666 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 CDCA4Q9BXL8 241 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 ULBP2Q9BZM5 246 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 LINC00470Q9BZP3 86 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 CCDC90BQ9GZT6 254 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 SLCO5A1Q9H2Y9 848 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 TP63Q9H3D4 680 aaPredicted RBP9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 COA3Q9Y2R0 106 aaPredicted RBP9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 COMMD3-BMI1R4GMX3 469 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 SPENQ96T58 3664 aaKnown RBP9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 SLC19A2O60779 497 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 ADRA2AP08913 450 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 MRPL3P09001 348 aaKnown RBP9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 ATP6V1E1P36543 226 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 MVKQ03426 396 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 IRF3Q14653 427 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 ETFDHQ16134 617 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 RNLSQ5VYX0 342 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 TMEM154Q6P9G4 183 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 LYPD4Q6UWN0 246 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 NUFIP2Q7Z417 695 aaKnown RBP9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 GLB1L2Q8IW92 636 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 TIGD4Q8IY51 512 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 GPR137CQ8N3F9 429 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 SVOPQ8N4V2 548 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF511Q8NB15 262 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 NSMAFQ92636 917 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 APH1AQ96BI3 265 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 EXOSC1Q9Y3B2 195 aaKnown RBP9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 EMC9Q9Y3B6 208 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 UGT2A1Q9Y4X1 527 aa9.06□□□□□ -0.96
VIPAS39-201ENST00000327028 DHHO43323 396 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 SELENOFO60613 162 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 UPK3AO75631 287 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 TFP02787 698 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ATP6V1B1P15313 513 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 C21orf33P30042 268 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 NAA10P41227 235 aaPredicted RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ACTC1P68032 377 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ACTA1P68133 377 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 EIF2S3LQ2VIR3 472 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 FOXL2NBQ6ZUU3 175 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 SEM1Q6ZVN7 128 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 FAM214BQ7L5A3 538 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 SLC16A9Q7RTY1 509 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 SLC35F2Q8IXU6 374 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ST6GALNAC3Q8NDV1 305 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 SLC26A10Q8NG04 563 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 CPT1CQ8TCG5 803 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 ZFP3Q96NJ6 502 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 INTS14Q96SY0 518 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 INPP5EQ9NRR6 644 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 MRPL22Q9NWU5 206 aaKnown RBP9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 SHANK1Q9Y566 2161 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 TVP23AA6NH52 213 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 GPANK1O95872 356 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 HLA-DQA2P01906 255 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 HRGP04196 525 aa9.05□□□□□ -0.96
VIPAS39-201ENST00000327028 CRHP06850 196 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms