RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 DEFA5Q01523 94 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 FHL1Q13642 323 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 EIF2B1Q14232 305 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 MESTQ5EB52 335 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 DMRTC1Q5HYR2 192 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 GLYATL3Q5SZD4 288 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 LINC01590Q5TEZ4 76 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 GRAMD2AQ8IUY3 354 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF248Q8NDW4 579 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 FAM3DQ96BQ1 224 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 PDE7BQ9NP56 450 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 COMMD9Q9P000 198 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 STEAP1Q9UHE8 339 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 FAM186AA6NE01 2351 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 FREM3P0C091 2139 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 IGKV1D-42A0A075B6H8 117 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ANKRD20A5PA0PJZ0 165 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 SIGLEC5O15389 551 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 TSPAN9O75954 239 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 BLKP51451 505 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 YPEL5P62699 121 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 SIGLEC14Q08ET2 396 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF141Q15928 474 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 VWA2Q5GFL6 755 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 SCARF2Q96GP6 870 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 DPYSL5Q9BPU6 564 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF426Q9BUY5 554 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 MS4A7Q9GZW8 240 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 CHST6Q9GZX3 395 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 TMEM185BQ9H7F4 350 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 SDHAF2Q9NX18 166 aa11.69□□□□□ -0.54
HMGCS1-201ENST00000325110 TCRBV16S1A1N1A0A5B0 115 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 GSTZ1O43708 216 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 CYB5AP00167 134 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 S100A11P31949 105 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 GPR3P46089 330 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 C2orf76Q3KRA6 126 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 CLLU1Q5K131 121 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 C16orf47Q6ZP98 133 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 KCTD9Q7L273 389 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 HAVCR2Q8TDQ0 301 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 HGDQ93099 445 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 TAS2R5Q9NYW4 299 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 VDAC3Q9Y277 283 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 IGHV3-20A0A0C4DH32 117 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 TGM6O95932 706 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 RORAP35398 523 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 SEC61A1P61619 476 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 EIF2B5Q13144 721 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 ACKR1Q16570 336 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 FAM74A1Q5RGS3 127 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 CORO6Q6QEF8 472 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 IDO2Q6ZQW0 420 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF440Q8IYI8 595 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 GPR119Q8TDV5 335 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 FBXO4Q9UKT5 387 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 EMC9Q9Y3B6 208 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 TMEM184BQ9Y519 407 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 REV3LO60673 3130 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 LINC00862A6NCI5 91 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 GGT3PA6NGU5 568 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 RHPN2P1A8MT19 583 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 H3BML4 177 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 GLSO94925 669 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 MPZL1O95297 269 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 AKAIN1P0CW23 69 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 CALCBP10092 127 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 MAP2K6P52564 334 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 HYAL1Q12794 435 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 KLHL26Q53HC5 615 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 STEAP1BQ6NZ63 245 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 TSSK4Q6SA08 328 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 BEST3Q8N1M1 668 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 MUC20Q8N307 709 aaPredicted RBP11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 TAS2R4Q9NYW5 299 aa11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 MRTO4Q9UKD2 239 aaKnown RBP11.68□□□□□ -0.54
HMGCS1-201ENST00000325110 TMEM212A6NML5 194 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 NDUFB6O95139 128 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 AHSA1O95433 338 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 VSIG10L2P0DP72 767 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 NUDT1P36639 197 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 RIDAP52758 137 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 C2orf68Q2NKX9 166 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 CDNFQ49AH0 187 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 SLC18B1Q6NT16 456 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 TMEM205Q6UW68 189 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 OR13C3Q8NGS6 347 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 PHYHIPQ92561 330 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 MNTQ99583 582 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF471Q9BX82 626 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 COPS7AQ9UBW8 275 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 MSRAQ9UJ68 235 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 NUP50Q9UKX7 468 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 MKL2Q9ULH7 1088 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 ABCA7Q8IZY2 2146 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 TMEM235A6NFC5 223 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 OR4C45A6NMZ5 311 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 UPK3AO75631 287 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 ITGA5P08648 1049 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 GIPP09681 153 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms