RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 NALCNQ8IZF0 1738 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 A0A1W2PNV4 684 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 CLDN17P56750 224 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 OR2T2Q6IF00 324 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 LCN15Q6UWW0 184 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 RHOUQ7L0Q8 258 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 SYT13Q7L8C5 426 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 LRRTM3Q86VH5 581 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 PTTG3PQ9NZH4 202 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 ADAM12O43184 909 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 PRAMEF4O60810 478 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 SERINC5Q86VE9 423 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 CPPED1Q9BRF8 314 aaPredicted RBP7.31□□□□□ -1.24
CIITA-201ENST00000324288 PARD6AQ9NPB6 346 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 MYOTQ9UBF9 498 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 ZC3H12DA2A288 527 aaKnown RBP7.31□□□□□ -1.24
CIITA-201ENST00000324288 POM121BA6NF01 834 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 SBK2P0C263 348 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 F2RP25116 425 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 PMPCAQ10713 525 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 HBMQ6B0K9 141 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 TMEM184AQ6ZMB5 413 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 MDGA2Q7Z553 956 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 BHLHE23Q8NDY6 225 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 OR52E1Q8NGJ3 308 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 PPP1R35Q8TAP8 253 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 TOLLIPQ9H0E2 274 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 EXOSC3Q9NQT5 275 aaKnown RBP7.31□□□□□ -1.24
CIITA-201ENST00000324288 NENFQ9UMX5 172 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 COTL1Q14019 142 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 ZNF528Q3MIS6 628 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 SIAH1Q8IUQ4 282 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 MKXQ8IYA7 352 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 ZNF296Q8WUU4 475 aaPredicted RBP7.31□□□□□ -1.24
CIITA-201ENST00000324288 RNF141Q8WVD5 230 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 TMPRSS5Q9H3S3 457 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 CNIH1O95406 144 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 IGHV3-9P01782 118 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 DPP4P27487 766 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 CAMK2BQ13554 666 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 ZNF239Q16600 458 aaKnown RBP7.31□□□□□ -1.24
CIITA-201ENST00000324288 PLK5Q496M5 336 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 WBP2NLQ6ICG8 309 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 PAQR6Q6TCH4 344 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 SLC6A20Q9NP91 592 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 ZNF331Q9NQX6 463 aaPredicted RBP7.31□□□□□ -1.24
CIITA-201ENST00000324288 PSORS1C1Q9UIG5 152 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 ALX3O95076 343 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 HMGN2P05204 90 aaKnown RBP7.31□□□□□ -1.24
CIITA-201ENST00000324288 ATP1B3P54709 279 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 FAAP20Q6NZ36 180 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 SERPINA11Q86U17 422 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 BORCS6Q96GS4 357 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 HHLA2Q9UM44 414 aa7.31□□□□□ -1.24
CIITA-201ENST00000324288 A0A0A6YYJ9 748 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 ITGB7P26010 798 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 CSF2RBP32927 897 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 STEAP1BQ6NZ63 245 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TMEM135Q86UB9 458 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SORCS2Q96PQ0 1159 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 DCLRE1CQ96SD1 692 aaKnown RBP7.3□□□□□ -1.24
CIITA-201ENST00000324288 METTL9Q9H1A3 318 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 RAB9BQ9NP90 201 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 LIPAP38571 399 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 ZNF468Q5VIY5 522 aaPredicted RBP7.3□□□□□ -1.24
CIITA-201ENST00000324288 TMEM102Q8N9M5 508 aaPredicted RBP7.3□□□□□ -1.24
CIITA-201ENST00000324288 OR52I2Q8NH67 350 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 FGGYQ96C11 551 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 RASD2Q96D21 266 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TMEM43Q9BTV4 400 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SUSD2Q9UGT4 822 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 PPP1R3CQ9UQK1 317 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TMX2-CTNND1H3BSU7 103 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 EIF4EP06730 217 aaKnown RBP7.3□□□□□ -1.24
CIITA-201ENST00000324288 SERTAD2Q14140 314 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 CD276Q5ZPR3 534 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SLC24A4Q8NFF2 622 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 ARRDC3Q96B67 414 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 ULBP2Q9BZM5 246 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SLC2A9Q9NRM0 540 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SLC35D1Q9NTN3 355 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 RBFOX1Q9NWB1 397 aaKnown RBP7.3□□□□□ -1.24
CIITA-201ENST00000324288 ZNF586Q9NXT0 402 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 NSG1A0A0A6YYJ2 146 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 HBQ1P09105 142 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 FABP4P15090 132 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SPI1P17947 270 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 CHRNB4P30926 498 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SLC6A11P48066 632 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 GSK3AP49840 483 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 F2RL1P55085 397 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 LTB4RQ15722 352 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 CLLU1OSQ5K130 101 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SLC16A14Q7RTX9 510 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 PLPP7Q8NBV4 271 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 C1QTNF6Q9BXI9 259 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 IL23AQ9NPF7 189 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 TRABD2BA6NFA1 517 aa7.3□□□□□ -1.24
CIITA-201ENST00000324288 SDCBPO00560 298 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms