RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 FGFR1OP2Q9NVK5 253 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 DUSP13Q9UII6 198 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 FBXL3Q9UKT7 428 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 SPEF1Q9Y4P9 236 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 UGT2A1Q9Y4X1 527 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 FAM220BPB1ANY3 271 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 OR5F1O95221 314 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 BCL10O95999 233 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 MT-ND1P03886 318 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 ACHEP22303 614 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 COL8A2P25067 703 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 LSP1P33241 339 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 KLF10Q13118 480 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 PIN1Q13526 163 aaPredicted RBP10.56□□□□□ -0.72
TPM3-204ENST00000323144 NKPD1Q17RQ9 610 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 TBC1D28Q2M2D7 210 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 SPATA46Q5T0L3 261 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 ARMC4Q5T2S8 1044 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 AVPI1Q5T686 147 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 TMEM53Q6P2H8 277 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 RFPL4BQ6ZWI9 263 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 SLC16A14Q7RTX9 510 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 HDXQ7Z353 690 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 LRRC18Q8N456 261 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 RBM15BQ8NDT2 890 aaKnown RBP10.56□□□□□ -0.72
TPM3-204ENST00000323144 OR8J3Q8NGG0 315 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 TMEM239Q8WW34 195 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 LRRC58Q96CX6 371 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 NMD3Q96D46 503 aaKnown RBP10.56□□□□□ -0.72
TPM3-204ENST00000323144 SGTBQ96EQ0 304 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 SIKE1Q9BRV8 207 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 MRPL13Q9BYD1 178 aaKnown RBP10.56□□□□□ -0.72
TPM3-204ENST00000323144 DENND2DQ9H6A0 471 aaPredicted RBP10.56□□□□□ -0.72
TPM3-204ENST00000323144 RNF121Q9H920 327 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 INIPQ9NRY2 104 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 TAAR3PQ9P1P4 343 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 CACNG2Q9Y698 323 aa10.56□□□□□ -0.72
TPM3-204ENST00000323144 IGLV3-9A0A075B6K5 115 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 A0A1W2PRG6 482 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 VSTM5A8MXK1 200 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 MGRN1O60291 552 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 CDC14BO60729 498 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 FARS2O95363 451 aaKnown RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 SNAP29O95721 258 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 HIST1H2ABP04908 130 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 LCKP06239 509 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 ACADSP16219 412 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 THBS2P35442 1172 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 SRP14P37108 136 aaKnown RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 WNT5AP41221 380 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 RBM34P42696 430 aaKnown RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 DAP3P51398 398 aaKnown RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 ZNF84P51523 738 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 ZNF133P52736 654 aaPredicted RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 DVL1P1P54792 670 aaPredicted RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 KLF3P57682 345 aaPredicted RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 CD47Q08722 323 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 CYBRD1Q53TN4 286 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 C10orf128Q5T292 105 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 HIST3H2AQ7L7L0 130 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 MICU2Q8IYU8 434 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 ZNF101Q8IZC7 436 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 IPCEF1Q8WWN9 437 aaPredicted RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 RASSF5Q8WWW0 418 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 NSMAFQ92636 917 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 RDH5Q92781 318 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 HIST1H2ACQ93077 130 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 ZNF583Q96ND8 569 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 RACGAP1Q9H0H5 632 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 VIPAS39Q9H9C1 493 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 SAR1AQ9NR31 198 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 TREM2Q9NZC2 230 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 TMEFF2Q9UIK5 374 aaPredicted RBP10.55□□□□□ -0.72
TPM3-204ENST00000323144 RIMS3Q9UJD0 308 aa10.55□□□□□ -0.72
TPM3-204ENST00000323144 TRAV27A0A087WT01 109 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 BBIP1A8MTZ0 92 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 C17orf100A8MU93 164 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 H7C1C5 153 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 J3KTA2 159 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 PPIHO43447 177 aaKnown RBP10.54□□□□□ -0.72
TPM3-204ENST00000323144 TSPAN19P0C672 248 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 ZNF32P17041 273 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 RBMXP38159 391 aaKnown RBP10.54□□□□□ -0.72
TPM3-204ENST00000323144 MPV17P39210 176 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 LCN6P62502 163 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 ERVK-25P63136 954 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 CCL8P80075 99 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 HSF2Q03933 536 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 CYLC2Q14093 348 aaPredicted RBP10.54□□□□□ -0.72
TPM3-204ENST00000323144 SLC36A2Q495M3 483 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 PABPC1L2AQ5JQF8 200 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 ZNF771Q7L3S4 317 aaPredicted RBP10.54□□□□□ -0.72
TPM3-204ENST00000323144 VTCN1Q7Z7D3 282 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 GLCCI1Q86VQ1 547 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 POU5F2Q8N7G0 328 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 CPEB3Q8NE35 698 aaKnown RBP10.54□□□□□ -0.72
TPM3-204ENST00000323144 OR13C2Q8NGS9 318 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 AKR7LQ8NHP1 331 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 C10orf82Q8WW14 230 aa10.54□□□□□ -0.72
TPM3-204ENST00000323144 RCN3Q96D15 328 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms