RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SPACA5Q96QH8 159 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 ENKD1Q9H0I2 346 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 FBRSQ9HAH7 460 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 SLC22A11Q9NSA0 550 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 RGPD3A6NKT7 1758 aaPredicted RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 RGPD4Q7Z3J3 1758 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 RPS10-NUDT3A0A1W2PQS6 291 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 PYCARD-AS1I3L0S3 204 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 SURF4O15260 269 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 HOXB5P09067 269 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 RPS10P46783 165 aaKnown RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 TLE3Q04726 772 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 CBFBQ13951 182 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 PRAMEF8Q5VWM4 474 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 PRAMEF7Q5VXH5 474 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 CAMKMTQ7Z624 323 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 GPR119Q8TDV5 335 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 MARC2Q969Z3 335 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 DEFB126Q9BYW3 111 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 NRIP3Q9NQ35 241 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 ANKRD10Q9NXR5 420 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 TGM6O95932 706 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 ACTBP60709 375 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 ACTG1P63261 375 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 KCTD18Q6PI47 426 aaPredicted RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 CORO6Q6QEF8 472 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 FOXQ1Q9C009 403 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 ZNF701Q9NV72 531 aaPredicted RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 ELF5Q9UKW6 265 aaPredicted RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 KIR2DS5A0A0G2JLQ3 304 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 A0A0G2JNG1 304 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 PRAMEF27A3QJZ7 478 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 KIR2DS3K7RE56 304 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 GIPP09681 153 aaPredicted RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 CTRB1P17538 263 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 PGCP20142 388 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 ZNF41P51814 821 aaPredicted RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 RIDAP52758 137 aaKnown RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 KIR2DS5Q14953 304 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 SGCBQ16585 318 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 LIPNQ5VXI9 398 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 CTRB2Q6GPI1 263 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 FAM122BQ7Z309 247 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 C19orf53Q9UNZ5 99 aaPredicted RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 MEIKINA0A087WXM9 373 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 LINC00862A6NCI5 91 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 F5H5K5 113 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 WRBO00258 174 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 MED6O75586 246 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 TSPAN15O95858 294 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 SERPINA5P05154 406 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 GLULP15104 373 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 IFNGR1P15260 489 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 ENPP1P22413 925 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 RPS27AP62979 156 aaKnown RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 UBA52P62987 128 aaKnown RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 CLINT1Q14677 625 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 HLXQ14774 488 aaPredicted RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 NIPAL3Q6P499 406 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 TMEM92Q6UXU6 159 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 CMSS1Q9BQ75 279 aaKnown RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 PPP1R3EQ9H7J1 279 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 PPP4R1LQ9P1A2 415 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 CGGBP1Q9UFW8 167 aaPredicted RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 TESQ9UGI8 421 aaKnown RBP13.94□□□□□ -0.18
VARS2-201ENST00000321897 A0A1W2PPV9 198 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 ZNF98A6NK75 572 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 ZNF264O43296 627 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 SRMP19623 302 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 EPHA4P54764 986 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 RAET1LQ5VY80 246 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 INTS14Q96SY0 518 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 MED18Q9BUE0 208 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 EVA1AQ9H8M9 152 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 UBQLN4Q9NRR5 601 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 CUTCQ9NTM9 273 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 NTMQ9P121 344 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 SLC22A7Q9Y694 548 aa13.94□□□□□ -0.18
VARS2-201ENST00000321897 IGKV1-8A0A0C4DH67 115 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 ZNF208O43345 1280 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 DUX1O43812 170 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 IGF2P01344 180 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 GUCA2AQ02747 115 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 MEP1BQ16820 701 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 MAMDC2Q7Z304 686 aaPredicted RBP13.93□□□□□ -0.18
VARS2-201ENST00000321897 COMTD1Q86VU5 262 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 WDSUB1Q8N9V3 476 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 WNT2BQ93097 391 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 OR5B2Q96R09 309 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 PHB2Q99623 299 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 PARPBPQ9NWS1 579 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 LSM5Q9Y4Y9 91 aaKnown RBP13.93□□□□□ -0.18
VARS2-201ENST00000321897 NPFFR2Q9Y5X5 522 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 AGFG1P52594 562 aaKnown RBP13.93□□□□□ -0.18
VARS2-201ENST00000321897 CAPZA1P52907 286 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 DEFA6Q01524 100 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 BATF2Q8N1L9 274 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 FBLIM1Q8WUP2 373 aa13.93□□□□□ -0.18
VARS2-201ENST00000321897 FOXRED1Q96CU9 486 aaPredicted RBP13.93□□□□□ -0.18
VARS2-201ENST00000321897 PITHD1Q9GZP4 211 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms