RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 WISP1O95388 367 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 NME1P15531 152 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 ACHEP22303 614 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 SKP1P63208 163 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 TDGQ13569 410 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 FKRPQ9H9S5 495 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 ST6GALNAC2Q9UJ37 374 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 C2orf72A6NCS6 295 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 TVP23AA6NH52 213 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 MBTPS2O43462 519 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 HCRTR2O43614 444 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 LEG1Q6P5S2 330 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 PXT1Q8NFP0 134 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 C3orf49Q96BT1 292 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 TWSG1Q9GZX9 223 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 SLC25A18Q9H1K4 315 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 CUTCQ9NTM9 273 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 URB1O60287 2271 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 HMSDA8MTL9 139 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 C11orf98E9PRG8 122 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 F8W036 122 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 PLGP00747 810 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 GLAP06280 429 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 CD27P26842 260 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 CENPAP49450 140 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 FGL1Q08830 312 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 PON3Q15166 354 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 NSDHLQ15738 373 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 ELFN2Q5R3F8 820 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 ARHGAP11AQ6P4F7 1023 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 FCRLAQ7L513 359 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF433Q8N7K0 673 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 OR10K1Q8NGX5 313 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 FAM174AQ8TBP5 190 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 PTPMT1Q8WUK0 201 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 SLC25A36Q96CQ1 311 aa14.1□□□□□ -0.15
SHROOM1-201ENST00000319854 PCNX3Q9H6A9 2034 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 SRFP11831 508 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 EDNRAP25101 427 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 NR0B1P51843 470 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 NRG3P56975 720 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 RPS11P62280 158 aaKnown RBP eCLIP14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 TOMM34Q15785 309 aaPredicted RBP14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 UBE2NLQ5JXB2 153 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 C1QL3Q5VWW1 255 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 RPL13AP3Q6NVV1 102 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF615Q8N8J6 731 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 NARS2Q96I59 477 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 PLEKHA1Q9HB21 404 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 FBXL3Q9UKT7 428 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 TRAV1-2A0A0B4J238 106 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 TRBV2A0A0J9YWF9 115 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 SCDO00767 359 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 KRT33AO76009 404 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 BCKDHBP21953 392 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 PTH2RP49190 550 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 MED11Q9P086 117 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 MLXQ9UH92 298 aa14.09□□□□□ -0.15
SHROOM1-201ENST00000319854 ACOD1A6NK06 481 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 METTL12A8MUP2 240 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 GABARAPH6UMI1 98 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 H7C2Y5 167 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 GPR31O00270 319 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 MPGP29372 298 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 FASLGP48023 281 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 HFEQ30201 348 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 PM20D2Q8IYS1 436 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 TEX19Q8NA77 164 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 NSMAFQ92636 917 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 PELI1Q96FA3 418 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 CNN2Q99439 309 aaKnown RBP14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 WDR13Q9H1Z4 485 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 BARX1Q9HBU1 254 aaPredicted RBP14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 TAS2R3Q9NYW6 316 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 KLHL9Q9P2J3 617 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 CHRNA9Q9UGM1 479 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 MKL2Q9ULH7 1088 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 RTTNQ86VV8 2226 aa14.08□□□□□ -0.15
SHROOM1-201ENST00000319854 A0A1B0GTH9 108 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 ANKRD20A5PA0PJZ0 165 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 GOSR2O14653 212 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 ICOSLGO75144 302 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 UTS2O95399 124 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 HOXB1P14653 301 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 FOLR1P15328 257 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 GDI2P50395 445 aaKnown RBP14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 EFNA3P52797 238 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 MARCH3Q86UD3 253 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC35F2Q8IXU6 374 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 KTI12Q96EK9 354 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 A0A087WUJ7 227 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 TLCD2A6NGC4 264 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF217O75362 1048 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 H2AFB1P0C5Y9 115 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 CD53P19397 219 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC2A5P22732 501 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 GRK6P43250 576 aa14.08□□□□□ -0.16
SHROOM1-201ENST00000319854 GPR143P51810 404 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms