RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 BLVRAP53004 296 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 RPL18Q07020 188 aaKnown RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 PUDPQ08623 228 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 CAMK2DQ13557 499 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 GSG1Q2KHT4 349 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ALG10Q5BKT4 473 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 FNDC7Q5VTL7 733 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 LINC00114Q6XXX2 140 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 NLRC3Q7RTR2 1065 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ATG4DQ86TL0 474 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 LIX1LQ8IVB5 337 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ST8SIA2Q92186 375 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 NAT6Q93015 286 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 KCTD12Q96CX2 325 aaKnown RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF578Q96N58 590 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 WDR77Q9BQA1 342 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 TRAF4Q9BUZ4 470 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 KCNK15Q9H427 330 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 MMP25Q9NPA2 562 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 C14orf105Q9NVL8 296 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF69Q9UC07 566 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 PISDQ9UG56 409 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ICAM5Q9UMF0 924 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SLC35A3Q9Y2D2 325 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 CCDC163A0A0D9SF12 145 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 G3V3Q6 166 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 M0R233 179 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 TSPAN2O60636 221 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SLC25A12O75746 678 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 HLA-DQA2P01906 255 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 TFP02787 698 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 KLK3P07288 261 aaPredicted RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 HK1P19367 917 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 RAB3BP20337 219 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SLC6A6P31641 620 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SOX2P48431 317 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 PSMD4P55036 377 aaKnown RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 NRG3P56975 720 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 PLA2G7Q13093 441 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SNTB2Q13425 540 aaKnown RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF74Q16587 644 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 CFAP77Q6ZQR2 320 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 CPEB2Q7Z5Q1 589 aaKnown RBP6.87□□□□□ -1.31
TRIM55-202ENST00000315962 MRGPREQ86SM8 312 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 KMT5CQ86Y97 462 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 CHRNA10Q9GZZ6 450 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 C20orf85Q9H1P6 137 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 KCNN2Q9H2S1 579 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 ADGRL4Q9HBW9 690 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 TRIM36Q9NQ86 728 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 SLC39A1Q9NY26 324 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 CHRNA9Q9UGM1 479 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 GNG8Q9UK08 70 aa6.87□□□□□ -1.31
TRIM55-202ENST00000315962 TRABD2BA6NFA1 517 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 CER1O95813 267 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 IGHA1P01876 353 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 SBK2P0C263 348 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 TMIGD3P0DMS9 266 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 OTX2P32243 289 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF85Q03923 595 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 GALEQ14376 348 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 MEP1BQ16820 701 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 YOD1Q5VVQ6 348 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 RNLSQ5VYX0 342 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 SLC35D2Q76EJ3 337 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 PM20D2Q8IYS1 436 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 NPEPL1Q8NDH3 523 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 OR52I2Q8NH67 350 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 NR4A3Q92570 626 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 NXPE2Q96DL1 559 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 GNRHR2Q96P88 292 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 MICU1Q9BPX6 476 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 PELOQ9BRX2 385 aaKnown RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 EMC6Q9BV81 110 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 B3GNT4Q9C0J1 378 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 TSPAN10Q9H1Z9 355 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 WDR76Q9H967 626 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 MYOTQ9UBF9 498 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 MGAT4CQ9UBM8 478 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 GRHPRQ9UBQ7 328 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 FBXL2Q9UKC9 423 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 COPS3Q9UNS2 423 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 A0A1W2PPL8 197 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 BLACEA4D250 179 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 ARPC5O15511 151 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 SUSD5O60279 629 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 TSPAN9O75954 239 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 MPZL1O95297 269 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 LDOC1O95751 146 aaPredicted RBP6.86□□□□□ -1.31
TRIM55-202ENST00000315962 HIST1H2ABP04908 130 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 ACSM4P0C7M7 580 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 KLK2P20151 261 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 HOXA6P31267 233 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 DCTDP32321 178 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 SFTPDP35247 375 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 MFSD13AQ14CX5 517 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 PON3Q15166 354 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 TOMM20Q15388 145 aa6.86□□□□□ -1.31
TRIM55-202ENST00000315962 B3GNTL1Q67FW5 361 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms