RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 NPR2P20594 1047 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARR3P36575 388 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF133P52736 654 aaPredicted RBP9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FXYD6P3P58550 94 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ACTR3P61158 418 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 COX10Q12887 443 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NPRL3Q12980 569 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ATP6AP1Q15904 470 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GSG1Q2KHT4 349 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NRN1LQ496H8 165 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CLEC12AQ5QGZ9 265 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ADAM5Q6NVV9 412 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZFP1Q6P2D0 407 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TMEM53Q6P2H8 277 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SHQ1Q6PI26 577 aaKnown RBP9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 LRFN4Q6PJG9 635 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC22A25Q6T423 547 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF627Q7L945 461 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC16A14Q7RTX9 510 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DPPA2Q7Z7J5 298 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HIPK1Q86Z02 1210 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC22A24Q8N4F4 322 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 OR5K1Q8NHB7 308 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DNAJC9Q8WXX5 260 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NRBF2Q96F24 287 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DUS3LQ96G46 650 aaKnown RBP9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RADILQ96JH8 1075 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC38A2Q96QD8 506 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FEVQ99581 238 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NIPSNAP1Q9BPW8 284 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RERGLQ9H628 205 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RNF121Q9H920 327 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CCNB1IP1Q9NPC3 277 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TMEM38BQ9NVV0 291 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FBXL3Q9UKT7 428 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 BAIAP2Q9UQB8 552 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 UTP20O75691 2785 aaKnown RBP9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ABCA4P78363 2273 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC22A23A1A5C7 686 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DPRXA6NFQ7 191 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARPC3O15145 178 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MGRN1O60291 552 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TXNDC12O95881 172 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CBR1P16152 277 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CD40P25942 277 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 LOXP28300 417 aaPredicted RBP9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CRABP1P29762 137 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PTDSS1P48651 473 aaKnown RBP9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CDH11P55287 796 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KRTAP10-9P60411 292 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KEAP1Q14145 624 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZSCAN26Q16670 478 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 C3orf36Q3SXR2 165 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC36A2Q495M3 483 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 LEG1Q6P5S2 330 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC25A47Q6Q0C1 308 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SEZ6L2Q6UXD5 910 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TMEM179BQ7Z7N9 219 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CDH24Q86UP0 819 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MDP1Q86V88 176 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZDHHC13Q8IUH4 622 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 LRRC18Q8N456 261 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KBTBD8Q8NFY9 601 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 OR2T33Q8NG76 320 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PYDC1Q8WXC3 89 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FBXW5Q969U6 566 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TSSK6Q9BXA6 273 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SYT4Q9H2B2 425 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SEC61A2Q9H9S3 476 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IL20Q9NYY1 176 aa9.6□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IGKV1D-43A0A0B4J1Z2 117 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IGHV1-18A0A0C4DH31 117 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 G3V2T6 193 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HS3ST1O14792 307 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC16A7O60669 478 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KHDRBS3O75525 346 aaKnown RBP9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PLAUP00749 431 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IFNGP01579 166 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IGKV3-15P01624 115 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HLA-HP01893 362 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CRYAAP02489 173 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RAF1P04049 648 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HIST1H1CP16403 213 aaKnown RBP9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MSR1P21757 451 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DNASE1P24855 282 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CDAP32320 146 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CENPAP49450 140 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IDH3GP51553 393 aaPredicted RBP9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MRPS34P82930 218 aaKnown RBP9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PIGFQ07326 219 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SGCAQ16586 387 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC36A3Q495N2 470 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC35F1Q5T1Q4 408 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PAMR1Q6UXH9 720 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CD300LDQ6UXZ3 194 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 C20orf204Q6ZNR8 217 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PTCHD4Q6ZW05 846 aa9.59□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 AMIGO2Q86SJ2 522 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms