RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PSG6Q00889 435 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF718Q3SXZ3 478 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SLC22A6Q4U2R8 563 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SLX4IPQ5VYV7 408 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 C9orf40Q8IXQ3 194 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 PRR18Q8N4B5 295 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 TMEM52Q8NDY8 209 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 HSD17B8Q92506 261 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 CXorf56Q9H5V9 222 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 FBXO34Q9NWN3 711 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SLC5A6Q9Y289 635 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 HSPB2A8KAH6 182 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ACTL6BO94805 426 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SERPINA5P05154 406 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ALPLP05186 524 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 FAM157BP0CG42 384 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 HSPB2Q16082 182 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 PAQR6Q6TCH4 344 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SULF2Q8IWU5 870 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 OIT3Q8WWZ8 545 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 KTI12Q96EK9 354 aaPredicted RBP8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SCP2D1Q9UJQ7 156 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SPTBP11277 2137 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 NKX6-3A6NJ46 265 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 CLDN25C9JDP6 229 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SCGNO76038 276 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 CELA2AP08217 269 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 RAC2P15153 192 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 PRKCDQ05655 676 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 RIPPLY1Q0D2K3 151 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF141Q15928 474 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 RPL22L1Q6P5R6 122 aaKnown RBP8.37□□□□□ -1.07
PTPRE-202ENST00000306042 UGT2A3Q6UWM9 527 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF620Q6ZNG0 422 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 OR5AS1Q8N127 324 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 CHDHQ8NE62 594 aaPredicted RBP8.37□□□□□ -1.07
PTPRE-202ENST00000306042 STEAP2Q8NFT2 490 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 CCDC107Q8WV48 283 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 FBXO17Q96EF6 278 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 CCDC120Q96HB5 630 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 FOXB1Q99853 325 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SLC5A7Q9GZV3 580 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 PLEKHJ1Q9NW61 149 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 DNAJB12Q9NXW2 375 aaKnown RBP8.37□□□□□ -1.07
PTPRE-202ENST00000306042 A0A1B0GTH9 108 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 FUOMA2VDF0 154 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 PRSS37A4D1T9 235 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SOCS6O14544 535 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ACOT8O14734 319 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 TIAF1O95411 115 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 IFNA21P01568 189 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ADH6P28332 368 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ART1P52961 327 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 SPOCK1Q08629 439 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 CACNA1CQ13936 2221 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ANKRD16Q6P6B7 361 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 CBLN3Q6UW01 205 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 FJX1Q86VR8 437 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF610Q8N9Z0 462 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF721Q8TF20 911 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 MYEF2Q9P2K5 600 aaKnown RBP8.37□□□□□ -1.07
PTPRE-202ENST00000306042 NEUROG3Q9Y4Z2 214 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 A0A1W2PQD3 144 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 A0A1W2PS29 197 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 LRRTM2O43300 516 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 NXPH2O95156 264 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 GRPP07492 148 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 SLC2A1P11166 492 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 VAMP1P23763 118 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 FABP6P51161 128 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 C3AR1Q16581 482 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 C4orf46Q504U0 113 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 ACSM3Q53FZ2 586 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 UNQ6494/PRO21346Q6UXR6 183 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 MARVELD2Q8N4S9 558 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 FAM83FQ8NEG4 500 aaPredicted RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 BORCS5Q969J3 196 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 C3orf49Q96BT1 292 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 FOXRED1Q96CU9 486 aaPredicted RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 TMEM43Q9BTV4 400 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 ANKRD60Q9BZ19 345 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 TTTY12Q9BZ98 90 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 CHRNA10Q9GZZ6 450 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 ESRP2Q9H6T0 727 aaKnown RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 TMEM212A6NML5 194 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 SLC19A2O60779 497 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 RBBP9O75884 186 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 HIST1H1CP16403 213 aaKnown RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 RAC3P60763 192 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 ADARB1P78563 741 aaKnown RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 OR8G1Q15617 311 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 HES5Q5TA89 166 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 TMEM108Q6UXF1 575 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 SLC16A9Q7RTY1 509 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 PIWIL3Q7Z3Z3 882 aaKnown RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 OR13C9Q8NGT0 318 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 SIRT3Q9NTG7 399 aaPredicted RBP8.36□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF175Q9Y473 711 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 TANC1Q9C0D5 1861 aa8.36□□□□□ -1.07
PTPRE-202ENST00000306042 GPRIN2O60269 458 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms