RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 NAXDQ8IW45 347 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OSGIN2Q9Y236 505 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 EDIL3O43854 480 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OPCMLQ14982 345 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 LYPD4Q6UWN0 246 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 FBXL2Q9UKC9 423 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 RCE1Q9Y256 329 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 IGHV5-51A0A0C4DH38 117 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 FITM1A5D6W6 292 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 E9PI62 339 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SC5DO75845 299 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF816Q0VGE8 651 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 BORAQ6PGQ7 559 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 BAIAP2L2Q6UXY1 529 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SLC15A4Q8N697 577 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 WDR31Q8NA23 367 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 OR6S1Q8NH40 331 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 OR14A2Q96R54 314 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SLC23A1Q9UHI7 598 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 MEIKINA0A087WXM9 373 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SLC35E2P0CK97 266 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SPINK9Q5DT21 86 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 GLIPR1L1Q6UWM5 242 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 PRSS41Q7RTY9 318 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SPEM1Q8N4L4 309 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 ZFP90Q8TF47 636 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 TAS2R4Q9NYW5 299 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 EDARQ9UNE0 448 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CACNG2Q9Y698 323 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SH2D7A6NKC9 451 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CBR1P16152 277 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF385BQ569K4 471 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 MAML2Q8IZL2 1156 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 HEYLQ9NQ87 328 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 TUBG2Q9NRH3 451 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 TMEM181Q9P2C4 612 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 M6PRP20645 277 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 P2RX3P56373 397 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 FOXK2Q01167 660 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CCBE1Q6UXH8 406 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 KISS1RQ969F8 398 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 REEP6Q96HR9 211 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 RAB9BQ9NP90 201 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 TMEM9Q9P0T7 183 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 ASH2LQ9UBL3 628 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 MYH1P12882 1939 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 DLG5Q8TDM6 1919 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 BOLA2-SMG1P6H3BVE0 249 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 GPR37O15354 613 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 NSA2O95478 260 aaKnown RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 TK1P04183 234 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 HOXD12P35452 270 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 RIPPLY1Q0D2K3 151 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SEMA6DQ8NFY4 1073 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CPNE4Q96A23 557 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 LRFN5Q96NI6 719 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 BARHL1Q9BZE3 327 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CENPBD1B2RD01 187 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 F8W036 122 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 DPM1O60762 260 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 OR2J3O76001 311 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SNRNP70P08621 437 aaKnown RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 RAB15P59190 212 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 BLOC1S1P78537 153 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 EBPQ15125 230 aaKnown RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SLC35G3Q8N808 338 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 OR5M8Q8NGP6 311 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 OR13C5Q8NGS8 318 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 ALKBH3Q96Q83 286 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CHODLQ9H9P2 273 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 TBX21Q9UL17 535 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CCDC187A0A096LP49 1063 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SLC31A2O15432 143 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SARAFQ96BY9 339 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 LIN37Q96GY3 246 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CPPED1Q9BRF8 314 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SLC38A1Q9H2H9 487 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 FBXL4Q9UKA2 621 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 CEACAM5P06731 702 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 RNF224P0DH78 156 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 IAPPP10997 89 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 NPY4RP50391 375 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 GALEQ14376 348 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 LCN8Q6JVE9 175 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 MS4A15Q8N5U1 240 aa7.13□□□□□ -1.27
SCN9A-201ENST00000303354 SAV1Q9H4B6 383 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-201ENST00000303354 FIGNL2A6NMB9 653 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 MC2RQ01718 297 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 CBLL1Q75N03 491 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 H1FNTQ75WM6 255 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 OR14K1Q8NGZ2 314 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 MRPS24Q96EL2 167 aaKnown RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 MRI1Q9BV20 369 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 NMES1Q9C002 83 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 TUBA8Q9NY65 449 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF281Q9Y2X9 895 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 OR2F2O95006 317 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 HSF1Q00613 529 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 ELMOD3Q96FG2 381 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms