RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CBARPQ8N350 705 aaPredicted RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 ARHGAP9Q9BRR9 750 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 NECAP2Q9NVZ3 263 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF354AO60765 605 aaPredicted RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 HIST1H1TP22492 207 aaPredicted RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 OR13D1Q8NGV5 346 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 OR4F5Q8NH21 305 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 OR5B3Q8NH48 314 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 TMEM255BQ8WV15 326 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 OR4F4Q96R69 305 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 USB1Q9BQ65 265 aaKnown RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 MED18Q9BUE0 208 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 AKIRIN1Q9H9L7 192 aaPredicted RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 ISYNA1Q9NPH2 558 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 A0A087WV62 115 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 OR8U8P0C7N1 319 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 MPGP29372 298 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 TRA2BP62995 288 aaKnown RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 ACKR1Q16570 336 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 IQCJQ1A5X6 159 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 GLCCI1Q86VQ1 547 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 EID2Q8N6I1 236 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 L3MBTL4Q8NA19 623 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 OR51A2Q8NGJ7 313 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 ZNRF4Q8WWF5 429 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 OR51I2Q9H344 312 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 CDCP1Q9H5V8 836 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 HEYLQ9NQ87 328 aaPredicted RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 RAB22AQ9UL26 194 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 XRN1Q8IZH2 1706 aaKnown RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 LTN1O94822 1766 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 CPMP14384 443 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 RAB1AP62820 205 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 SAXO2Q658L1 398 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 LINC00346Q8IVM7 164 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 NANOGP1Q8N7R0 232 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 MEGF10Q96KG7 1140 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 GABARAPH6UMI1 98 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 ACHEP22303 614 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 OR1D4P47884 311 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 TMEM201Q5SNT2 666 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 OVCH1Q7RTY7 1134 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 PRICKLE2Q7Z3G6 844 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 HSD11B1LQ7Z5J1 315 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 OR52N1Q8NH53 320 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 RPUSD4Q96CM3 377 aaKnown RBP13.71□□□□□ -0.21
SCN3B-201ENST00000299333 UBXN10Q96LJ8 280 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 SMIM14Q96QK8 99 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 KCNJ15Q99712 375 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 IL17BQ9UHF5 180 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 FLVCR2Q9UPI3 526 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 PLSCR5A0PG75 271 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 JTBO76095 146 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 RFX2P48378 723 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 RPS15P62841 145 aaKnown RBP13.71□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF480Q8WV37 535 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 FOXJ1Q92949 421 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 UBQLN4Q9NRR5 601 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 CGGBP1Q9UFW8 167 aaPredicted RBP13.71□□□□□ -0.21
SCN3B-201ENST00000299333 Q9Y3F1 56 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 MN1Q10571 1320 aaPredicted RBP13.71□□□□□ -0.21
SCN3B-201ENST00000299333 COX20Q5RI15 118 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF620Q6ZNG0 422 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 OR52E1Q8NGJ3 308 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 DYNC2LI1Q8TCX1 351 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 SHDQ96IW2 340 aa13.71□□□□□ -0.21
SCN3B-201ENST00000299333 TAAR5O14804 337 aa13.71□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF280AP59817 542 aaPredicted RBP13.71□□□□□ -0.22
SCN3B-201ENST00000299333 FAAP20Q6NZ36 180 aa13.71□□□□□ -0.22
SCN3B-201ENST00000299333 RPUSD3Q6P087 351 aaKnown RBP13.71□□□□□ -0.22
SCN3B-201ENST00000299333 C19orf35Q6ZS72 473 aa13.71□□□□□ -0.22
SCN3B-201ENST00000299333 TMEM25Q86YD3 366 aa13.71□□□□□ -0.22
SCN3B-201ENST00000299333 DTD1Q8TEA8 209 aa13.71□□□□□ -0.22
SCN3B-201ENST00000299333 TXNRD2Q9NNW7 524 aa13.71□□□□□ -0.22
SCN3B-201ENST00000299333 SELENOFO60613 162 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 TBX19O60806 448 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 PCBD1P61457 104 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 MAT1AQ00266 395 aaKnown RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 FABP9Q0Z7S8 132 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF511Q8NB15 262 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 FIBINQ8TAL6 211 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 GHRLQ9UBU3 117 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 RNF24Q9Y225 148 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 MED1Q15648 1581 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 BMPR1BO00238 502 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ST8SIA3O43173 380 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 BMPR1AP36894 532 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 NKX2-1P43699 371 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 DUSP3P51452 185 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 CTSCP53634 463 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 JAG1P78504 1218 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 GLIPR1L1Q6UWM5 242 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 DLK2Q6UY11 383 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 MAML2Q8IZL2 1156 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF775Q96BV0 537 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 FIZ1Q96SL8 496 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 SCML1Q9UN30 329 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 CHEK1O14757 476 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms