RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 THAP4Q8WY91 577 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 ZMYND19Q96E35 227 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-201ENST00000292476 DMRTB1Q96MA1 342 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 ZNF275Q9NSD4 429 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-201ENST00000292476 ABI3Q9P2A4 366 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 CHCHD2Q9Y6H1 151 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-201ENST00000292476 SDK2Q58EX2 2172 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 IGKV1D-42A0A075B6H8 117 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 TRAV36DV7A0A075B6V5 113 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 A8MV72 311 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 ZNF879B4DU55 563 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 ADAM10O14672 748 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 CTDSPLO15194 276 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 OR2T1O43869 369 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 FZD7O75084 574 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 CELA2AP08217 269 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 TCEA1P23193 301 aaKnown RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 MST1P26927 711 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 RCVRNP35243 200 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 ACVR1BP36896 505 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 MMP15P51511 669 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 OR10A3P58181 314 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 MRPL28Q13084 256 aaKnown RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 TNK1Q13470 666 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 ZNF74Q16587 644 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 YIF1BQ5BJH7 314 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 FAM27D1Q5T7N8 215 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 DTX1Q86Y01 620 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 OR6S1Q8NH40 331 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 LILRB4Q8NHJ6 448 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 SNIP1Q8TAD8 396 aaKnown RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 ZFAND1Q8TCF1 268 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 PAQR8Q8TEZ7 354 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 SNX33Q8WV41 574 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 FYTTD1Q96QD9 318 aaKnown RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 GON7Q9BXV9 100 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 ANGPTL4Q9BY76 406 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 FKRPQ9H9S5 495 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 GALNT9Q9HCQ5 603 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 COPZ2Q9P299 210 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 TMED7-TICAM2A0A0A6YYA0 188 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 ETV2O00321 342 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 GSTZ1O43708 216 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 GYPBP06028 91 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 EPXP11678 715 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 SPI1P17947 270 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 RPL4P36578 427 aaKnown RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 CD83Q01151 205 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 AIMP2Q13155 320 aaKnown RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 MFSD13AQ14CX5 517 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 KCTD20Q7Z5Y7 419 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 SLC7A5P1Q8MH63 180 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 UBE2J2Q8N2K1 259 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 AKAP1Q92667 903 aaKnown RBP eCLIP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 MRGPRX4Q96LA9 322 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 MRI1Q9BV20 369 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 SERINC1Q9NRX5 453 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 PAQR5Q9NXK6 330 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 MRPL39Q9NYK5 338 aaKnown RBP15.12■□□□□ 0.01
CPSF4-201ENST00000292476 SPATA2Q9UM82 520 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 MOKQ9UQ07 419 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 TMED7Q9Y3B3 224 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 CACNG2Q9Y698 323 aa15.12■□□□□ 0.01
CPSF4-201ENST00000292476 ANKRD11Q6UB99 2663 aaPredicted RBP15.11■□□□□ 0.01
CPSF4-201ENST00000292476 ZZEF1O43149 2961 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 LAMA5O15230 3695 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 EXPH5Q8NEV8 1989 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 A0A087WZY1 265 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 PDCD5O14737 125 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 ZNF208O43345 1280 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 GMFGO60234 142 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 SUSD5O60279 629 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 GLCEO94923 617 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 PRKCAP17252 672 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 EIF2S3P41091 472 aaKnown RBP15.11■□□□□ 0.01
CPSF4-201ENST00000292476 PTGDSP41222 190 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 EIF1P41567 113 aaKnown RBP15.11■□□□□ 0.01
CPSF4-201ENST00000292476 GZMKP49863 264 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 FAPQ12884 760 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 MAB21L1Q13394 359 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 MADCAM1Q13477 382 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 TOMM34Q15785 309 aaPredicted RBP15.11■□□□□ 0.01
CPSF4-201ENST00000292476 TP53I3Q53FA7 332 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 SLC25A53Q5H9E4 307 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 ACER2Q5QJU3 275 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 SLC6A19Q695T7 634 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 RPTNQ6XPR3 784 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 YIPF7Q8N8F6 280 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 OR4K17Q8NGC6 315 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 ADAMTS17Q8TE56 1095 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 TMEM246Q9BRR3 403 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 ABCG5Q9H222 651 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 KLHL1Q9NR64 748 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 MED11Q9P086 117 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 HIF3AQ9Y2N7 669 aa15.11■□□□□ 0.01
CPSF4-201ENST00000292476 A0A1W2PRG6 482 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 C7orf66A4D0T2 115 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 TXNDC12O95881 172 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 DHFRP00374 187 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms