RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF28P17035 718 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 G0S2P27469 103 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 MTNR1BP49286 362 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 TNK1Q13470 666 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 STEAP1BQ6NZ63 245 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 OR51D1Q8NGF3 324 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 SDSLQ96GA7 329 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 LINC00615Q96LM1 132 aaPredicted RBP11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 MAP3K3Q99759 626 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 NELFAQ9H3P2 528 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 METTL7AQ9H8H3 244 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 GNG13Q9P2W3 67 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 SERTAD3Q9UJW9 196 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 FBXL4Q9UKA2 621 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 PRELID3BQ9Y3B1 194 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 SLC16A7O60669 478 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 CNR1P21554 472 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 TAGLN2P37802 199 aaKnown RBP11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 MLF2Q15773 248 aaPredicted RBP11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 OR51S1Q8NGJ8 323 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 FGF14Q92915 247 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 YIPF5Q969M3 257 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 FBXW5Q969U6 566 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 ALG12Q9BV10 488 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 C20orf141Q9NUB4 165 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 ACOXLQ9NUZ1 547 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 SURF4O15260 269 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 SHOXO15266 292 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 P2RX6O15547 441 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 PAPLNO95428 1278 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 HMGA2P52926 109 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 SSTP61278 116 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 MRPS34P82930 218 aaKnown RBP11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 SRSF5Q13243 272 aaKnown RBP11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF695Q8IW36 515 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 SULF2Q8IWU5 870 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 OR4N2Q8NGD1 307 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 OR52N1Q8NH53 320 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 GPA33Q99795 319 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 ZFP57Q9NU63 452 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 GMEB2Q9UKD1 530 aa11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 NYNRINQ9P2P1 1898 aaKnown RBP11.51□□□□□ -0.57
SLC6A1-201ENST00000287766 ADAM10O14672 748 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 LIMS3P0CW19 117 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 LIMS4P0CW20 117 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 UBL4AP11441 157 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 TPBGQ13641 420 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF611Q8N823 705 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 OR52I2Q8NH67 350 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 BCL2L10Q9HD36 194 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 MED17Q9NVC6 651 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 LRIT1Q9P2V4 623 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 ENTPD2Q9Y5L3 495 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 PSME4Q14997 1843 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 HIST1H1CP16403 213 aaKnown RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 RABIFP47224 123 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 EVX1P49640 407 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 MVDP53602 400 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 TAS2R20P59543 309 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 ZP2Q05996 745 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 PHF19Q5T6S3 580 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 HOXB13Q92826 284 aaPredicted RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 TRMT61AQ96FX7 289 aaKnown RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 MYADMQ96S97 322 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 ATF6BQ99941 703 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 PIGQQ9BRB3 760 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 NICN1Q9BSH3 213 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 BARHL1Q9BZE3 327 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 SLC19A3Q9BZV2 496 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 GCM1Q9NP62 436 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 TNS1Q9HBL0 1735 aaKnown RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 C2orf72A6NCS6 295 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 EIF4EP06730 217 aaKnown RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF44P15621 663 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 NQO2P16083 231 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 DHPSP49366 369 aaPredicted RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 PCBP4P57723 403 aaKnown RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 CLRN1P58418 232 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 TEKQ02763 1124 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 C4orf17Q53FE4 359 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 UBE2NLQ5JXB2 153 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 RDH10Q8IZV5 341 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 OR4K17Q8NGC6 315 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 VPS25Q9BRG1 176 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 PBX4Q9BYU1 374 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 ASB6Q9NWX5 421 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 PRAMEF25A6NGN4 478 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 KDM4EB2RXH2 506 aaPredicted RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 EMP2P54851 167 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 BTG2P78543 158 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 SLC25A35Q3KQZ1 300 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 FAM109BQ6ICB4 259 aaPredicted RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 NIPAL3Q6P499 406 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 DIDO1Q9BTC0 2240 aaKnown RBP11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 ZNF281Q9Y2X9 895 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 CBY1Q9Y3M2 126 aa11.5□□□□□ -0.57
SLC6A1-201ENST00000287766 CFIP05156 583 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms