RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PDZD9Q8IXQ8 264 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 OR14A2Q96R54 314 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 DCLRE1CQ96SD1 692 aaKnown RBP16.95■□□□□ 0.3
PCDH1-201ENST00000287008 NTNG1Q9Y2I2 539 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 ANKRD34BA5PLL1 514 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 PRKNO60260 465 aaPredicted RBP16.95■□□□□ 0.3
PCDH1-201ENST00000287008 CLDN15P56746 228 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 TEKQ02763 1124 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 OR11G2Q8NGC1 345 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 RPL3LQ92901 407 aaKnown RBP16.95■□□□□ 0.3
PCDH1-201ENST00000287008 S100PBPQ96BU1 408 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 SPACA9Q96E40 222 aaPredicted RBP16.95■□□□□ 0.3
PCDH1-201ENST00000287008 ELMOD3Q96FG2 381 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 SULT4A1Q9BR01 284 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 OR51J1Q9H342 316 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 TMEM165Q9HC07 324 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 ASH2LQ9UBL3 628 aa16.95■□□□□ 0.3
PCDH1-201ENST00000287008 A0A1W2PQ09 198 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 H7C2Y5 167 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 HOXB5P09067 269 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 CAV3P56539 151 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 RPS25P62851 125 aaKnown RBP16.94■□□□□ 0.3
PCDH1-201ENST00000287008 PRSS36Q5K4E3 855 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 S100A7AQ86SG5 101 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 OR6M1Q8NGM8 313 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 OR5B12Q96R08 314 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 TEAD3Q99594 435 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 NOX3Q9HBY0 568 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 TIMM10BQ9Y5J6 103 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 ATG2BQ96BY7 2078 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 SPAG17Q6Q759 2223 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 A0A1W2PPH5 198 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 TOR1AO14656 332 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 SHOXO15266 292 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 TMEM215Q68D42 235 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 IGHV1OR21-1A0A087WYE8 117 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 TSPAN11A1L157 253 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 FRG2CA6NGY1 282 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 PAHP00439 452 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 CRYABP02511 175 aaKnown RBP16.94■□□□□ 0.3
PCDH1-201ENST00000287008 SBK2P0C263 348 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 FAM198BQ6UWH4 519 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 NT5CQ8TCD5 201 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 PPIL3Q9H2H8 161 aaKnown RBP16.94■□□□□ 0.3
PCDH1-201ENST00000287008 ACER3Q9NUN7 267 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 CTSFQ9UBX1 484 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 CEP250Q9BV73 2442 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 ENSAO43768 121 aaKnown RBP16.94■□□□□ 0.3
PCDH1-201ENST00000287008 SCG5P05408 212 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 UBBP0CG47 229 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 CD300LGQ6UXG3 332 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 TAAR8Q969N4 342 aa16.94■□□□□ 0.3
PCDH1-201ENST00000287008 OR2A25A4D2G3 310 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 SELENOFO60613 162 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 TSPAN15O95858 294 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 TBXA2RP21731 343 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 LIPNQ5VXI9 398 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 GDPD3Q7L5L3 318 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 BCDIN3DQ7Z5W3 292 aaKnown RBP16.93■□□□□ 0.3
PCDH1-201ENST00000287008 KLHDC8BQ8IXV7 354 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 SECTM1Q8WVN6 248 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 HIPK2Q9H2X6 1198 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 PAPPAQ13219 1627 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 A0A087WZY1 265 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 NXPH1P58417 271 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF92Q03936 586 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 UBE2NLQ5JXB2 153 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 CLVS2Q5SYC1 327 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 KDM4DQ6B0I6 523 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 SYT9Q86SS6 491 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 DMBX1Q8NFW5 382 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 SEMA6DQ8NFY4 1073 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 LGALS14Q8TCE9 139 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 ALG14Q96F25 216 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 MFFQ9GZY8 342 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 PIGLQ9Y2B2 252 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 DOCK2Q92608 1830 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 H7C1Q1 480 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 TNFRSF10AO00220 468 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 COL9A1P20849 921 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 SIGLEC14Q08ET2 396 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 MYBPHQ13203 477 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 EMC4Q5J8M3 183 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 GLYATL3Q5SZD4 288 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 BHLHA9Q7RTU4 235 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 OR52I1Q8NGK6 324 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 NKX3-1Q99801 234 aaPredicted RBP16.93■□□□□ 0.3
PCDH1-201ENST00000287008 GABRG3Q99928 467 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 OR2B2Q9GZK3 357 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 EMC7Q9NPA0 242 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 PPP1R14DQ9NXH3 145 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 TAS2R16Q9NYV7 291 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 PCDHGA5Q9Y5G8 931 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 LILRB5O75023 590 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 RGS11O94810 467 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 HLA-AP01891 365 aaKnown RBP16.93■□□□□ 0.3
PCDH1-201ENST00000287008 IFNA4P05014 189 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 IL3RAP26951 378 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 SDHAP31040 664 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms