RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 NINQ8N4C6 2090 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 HLA-AP01891 365 aaKnown RBP10.31□□□□□ -0.76
USP6NL-201ENST00000277575 PSMB1P20618 241 aaKnown RBP10.31□□□□□ -0.76
USP6NL-201ENST00000277575 CPT2P23786 658 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 MAP2K6P52564 334 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 TAS2R46P59540 309 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 RPL18Q07020 188 aaKnown RBP10.31□□□□□ -0.76
USP6NL-201ENST00000277575 CTU2Q2VPK5 515 aaKnown RBP10.31□□□□□ -0.76
USP6NL-201ENST00000277575 ZNF610Q8N9Z0 462 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 PLPP7Q8NBV4 271 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 OR6M1Q8NGM8 313 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 ZFAND1Q8TCF1 268 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 MBOAT4Q96T53 435 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 DUSP21Q9H596 190 aa10.31□□□□□ -0.76
USP6NL-201ENST00000277575 ZC3H12DA2A288 527 aaKnown RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 PCP4L1A6NKN8 68 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SGCEO43556 437 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 IFNA1P01562 189 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 HOXB5P09067 269 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SPI1P17947 270 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 TEKQ02763 1124 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 KIAA0040Q15053 153 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 AGAP7PQ5VUJ5 663 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 FAM219BQ5XKK7 198 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ELP2Q6IA86 826 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 PGAP1Q75T13 922 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SFTPA1Q8IWL2 248 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 RIMKLAQ8IXN7 391 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 FAM71CQ8NEG0 241 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 GABARAPL3Q9BY60 117 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ASH2LQ9UBL3 628 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ZNF346Q9UL40 294 aaKnown RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 GPR55Q9Y2T6 319 aaPredicted RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 HRH3Q9Y5N1 445 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 BET1O15155 118 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SSX5O60225 188 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 PIPP12273 146 aaPredicted RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 GRB2P62993 217 aaKnown RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 RNF4P78317 190 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 GALEQ14376 348 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 RHEBQ15382 184 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ZNF585AQ6P3V2 769 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ZNF793Q6ZN11 406 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 NOXA1Q86UR1 476 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 TMEM99Q8N816 258 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 PIGTQ969N2 578 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 FAM3DQ96BQ1 224 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 GABRG3Q99928 467 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 GABARAPL1Q9H0R8 117 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 PLCXD1Q9NUJ7 323 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 COL5A3P25940 1745 aaPredicted RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ADAMTSL1Q8N6G6 1762 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SPDEFO95238 335 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 QDPRP09417 244 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 CHRNB1P11230 501 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SRMP19623 302 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 DIO1P49895 249 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ETV1P50549 477 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SLC10A1Q14973 349 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 AKR1C8PQ5T2L2 129 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 RNF128Q8TEB7 428 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 DEFB127Q9H1M4 99 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ZMAT3Q9HA38 289 aaKnown RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 CTSFQ9UBX1 484 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 TRAPPC2LQ9UL33 140 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 DOCK3Q8IZD9 2030 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 IGHV1OR15-9A0A0B4J2B8 117 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SCGB2A1O75556 95 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 HTR2BP41595 481 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 RPS18P62269 152 aaKnown RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 PRAMEF9Q5VWM5 478 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 KIRREL2Q6UWL6 708 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 Q6ZTK2 550 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 NCCRP1Q6ZVX7 275 aaPredicted RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 TMEM179BQ7Z7N9 219 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 OR6V1Q8N148 313 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 NKAIN3Q8N8D7 197 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 TTC9Q92623 222 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 RAB39BQ96DA2 213 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 TSSK2Q96PF2 358 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 RGCCQ9H4X1 137 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 LIN7BQ9HAP6 207 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 EMC7Q9NPA0 242 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 SLC6A13Q9NSD5 602 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 ACOXLQ9NUZ1 547 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 RBFOX1Q9NWB1 397 aaKnown RBP10.3□□□□□ -0.76
USP6NL-201ENST00000277575 B3GALT5Q9Y2C3 310 aa10.3□□□□□ -0.76
USP6NL-201ENST00000277575 FRG2CA6NGY1 282 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 C5orf67F2Z3F1 127 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 CXCL13O43927 109 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 PAPLNO95428 1278 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 MSR1P21757 451 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 PTPN6P29350 595 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 SLC14A1Q13336 389 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 EMC4Q5J8M3 183 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 GUSBP11Q6P575 273 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 TMEM81Q6P7N7 255 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 LYPD4Q6UWN0 246 aa10.29□□□□□ -0.76
USP6NL-201ENST00000277575 IDO2Q6ZQW0 420 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms