RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SEZ6L2Q6UXD5 910 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 GPAT4Q86UL3 456 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 LINC00346Q8IVM7 164 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 JAGN1Q8N5M9 183 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 ST8SIA2Q92186 375 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 MMP25Q9NPA2 562 aa15.21■□□□□ 0.02
SQLE-201ENST00000265896 GPRIN2O60269 458 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 SLC16A7O60669 478 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 RBM34P42696 430 aaKnown RBP15.2■□□□□ 0.02
SQLE-201ENST00000265896 EXOSC6Q5RKV6 272 aaKnown RBP15.2■□□□□ 0.02
SQLE-201ENST00000265896 ZNF454Q8N9F8 522 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 ACBD4Q8NC06 268 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 ZNF75AQ96N20 296 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 CMKLR1Q99788 373 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 C7orf50Q9BRJ6 194 aaKnown RBP15.2■□□□□ 0.02
SQLE-201ENST00000265896 MFFQ9GZY8 342 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 DHCR7Q9UBM7 475 aaKnown RBP15.2■□□□□ 0.02
SQLE-201ENST00000265896 AUP1Q9Y679 476 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 GGT3PA6NGU5 568 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 F5H5P2 479 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 CTDSPLO15194 276 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 EN2P19622 333 aaPredicted RBP15.2■□□□□ 0.02
SQLE-201ENST00000265896 GGTLC2Q14390 218 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 GLYATL3Q5SZD4 288 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 ARSKQ6UWY0 536 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 GSG1LQ6UXU4 331 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 FAM122BQ7Z309 247 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 ZNF227Q86WZ6 799 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 OR2AK2Q8NG84 335 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 SPACA5Q96QH8 159 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 AKAP7Q9P0M2 348 aaPredicted RBP15.2■□□□□ 0.02
SQLE-201ENST00000265896 CYP8B1Q9UNU6 501 aa15.2■□□□□ 0.02
SQLE-201ENST00000265896 YBX2Q9Y2T7 364 aaKnown RBP15.2■□□□□ 0.02
SQLE-201ENST00000265896 PCDH15Q96QU1 1955 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 OR2M5A3KFT3 312 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 TSPAN9O75954 239 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 AK1P00568 194 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 TACSTD2P09758 323 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 MYF5P13349 255 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 ZP2Q05996 745 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 ZNF684Q5T5D7 378 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 ASPHD2Q6ICH7 369 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 RHOUQ7L0Q8 258 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 SLC16A9Q7RTY1 509 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 ELSPBP1Q96BH3 223 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 SCARF2Q96GP6 870 aaPredicted RBP15.19■□□□□ 0.02
SQLE-201ENST00000265896 TGM7Q96PF1 710 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 NPAS1Q99742 590 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 WDR13Q9H1Z4 485 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 TMEM185BQ9H7F4 350 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 PLEKHA6Q9Y2H5 1048 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 OR5K3A6NET4 321 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 TMEM235A6NFC5 223 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 SDC3O75056 442 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 GIPP09681 153 aaPredicted RBP15.19■□□□□ 0.02
SQLE-201ENST00000265896 PPP3CBP16298 524 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 M6PRP20645 277 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 IL11P20809 199 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 GPR3P46089 330 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 BIKQ13323 160 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 TAF13Q15543 124 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 SLC6A19Q695T7 634 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 LRFN4Q6PJG9 635 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 CASTOR1Q8WTX7 329 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 FAM3DQ96BQ1 224 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 COMMD4Q9H0A8 199 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 TAS2R4Q9NYW5 299 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 STEAP1Q9UHE8 339 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 LHX6Q9UPM6 363 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 COL6A3P12111 3177 aa15.19■□□□□ 0.02
SQLE-201ENST00000265896 ICOSLGO75144 302 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 OR6A2O95222 327 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 ABHD16AO95870 558 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 AMY2AP04746 511 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 RNH1P13489 461 aaKnown RBP15.18■□□□□ 0.02
SQLE-201ENST00000265896 HLA-DOBP13765 273 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 SDHAP31040 664 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 RAG2P55895 527 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 RAP2BP61225 183 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 OR52W1Q6IF63 320 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 RGS7BPQ6MZT1 257 aaPredicted RBP15.18■□□□□ 0.02
SQLE-201ENST00000265896 TSSK4Q6SA08 328 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 ADGRG3Q86Y34 549 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 OR1J2Q8NGS2 313 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 PRR13Q9NZ81 148 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 CLDN16Q9Y5I7 305 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 PRRC2CQ9Y520 2896 aaKnown RBP15.18■□□□□ 0.02
SQLE-201ENST00000265896 TEX51A0A1B0GUA7 166 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 MFSD2BA6NFX1 497 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 TRIM77I1YAP6 450 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 PPM1BO75688 479 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 HIST1H2ABP04908 130 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 RBMS2Q15434 407 aaKnown RBP15.18■□□□□ 0.02
SQLE-201ENST00000265896 ZCCHC12Q6PEW1 402 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 HIST3H2AQ7L7L0 130 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 GVQW1Q8N7I0 195 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 FAM71CQ8NEG0 241 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 GPR148Q8TDV2 347 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 HIST1H2ACQ93077 130 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 ADAT1Q9BUB4 502 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms